Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0301 |
Symbol | |
ID | 5153093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 306005 |
End bp | 306547 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640555325 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001236500 |
Protein GI | 148251915 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.246546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAC AGCTCTCGGC GAAGGACTGG CTGGACCAGG GTCTCAAGGT GCTGGCAAGC CGTGGCTTCA CCGCGCTCAA GGCCGAGCCG ATGGCCAAGG TGATGGGGGT GTCGCGCGGC AGCTTCTACT GGCACTTTGC CGACGTGGCC GCGTTCCATG CCGCGTTGCT GAAGCATTGG CGCGACATCG CAGCCGAGCA GATCATCAGC GGGGTCGAGG CGAGCGCTGG CGACGAACCG GCGATCGCCG TGCTGCTGCG TCGCAGCTTT ACCATCAGGC TCAGTCTGGA GCGGGCCGTC CGCAGCTGGG CCGCGTCGGA CGCGGCGGCG CAGCACGCCG TGCAGGCGAT CGACAAGCGC CGACTGGGCT ATATCGAGGG CTTGCTCACC GCCCGAGGTC TGCCGCCGGA TGTCGCCCAG GCCCGCGCGC AGGTGCTGTA TTGGGCGTTT CTCGGCCACG CATTGTCCGG CCGACCGCTG CCGGCCGGAC AGCAGGAGGC CGCGCTCGGC GAGCTGATCC GGATCGCGCT GCATGAGCCT TGA
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Protein sequence | MNEQLSAKDW LDQGLKVLAS RGFTALKAEP MAKVMGVSRG SFYWHFADVA AFHAALLKHW RDIAAEQIIS GVEASAGDEP AIAVLLRRSF TIRLSLERAV RSWAASDAAA QHAVQAIDKR RLGYIEGLLT ARGLPPDVAQ ARAQVLYWAF LGHALSGRPL PAGQQEAALG ELIRIALHEP
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