Gene BBta_0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0286 
Symbol 
ID5153140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp289879 
End bp291804 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content72% 
IMG OID640555310 
ProductHemY domain-containing protein 
Protein accessionYP_001236485 
Protein GI148251900 
COG category[S] Function unknown 
COG ID[COG3898] Uncharacterized membrane-bound protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGGA TCGTTGTCTT CCTTATCCTG GTCGGGCTCG CCGCCGCGGG CTCGGCCTGG 
GTCGCCGAGC AGACCGGCGA TGTCGTGCTG AACTGGGGTC CGTGGCGCAT CGCCATGACC
CTGCCAGTCT TCGTGCTGGC GCTCGGCCTG ACCATCACGG CCTGCGTGCT GGTCTGGAAC
CTGATCAGCG CGCTGTTGCG GGCGCCGGGA CGGATTCGCA ACCATCACCG CGCCCGCCGC
CACCAGCGCG GACGGCATGC CATCACCCAC GGCTTGCTGG CCATCGGCCA TGGCGATCTG
ACCGCGGCGC GCCAGCACGC CGATGCCGCC AAGCGGCTCG CCGGCGACGA TCCGCTGACC
CTGCTGCTGC ATGCGCAGGC CGCCCAGCTC GGCGGCGACC GCGATGGCGC GCAGCGCGCC
TTCCGGGCGA TGGCCGAGCG CCACGACACC CGGCTGCTCG GCCTGCGCGG CCTGTTCATC
GAGGCGCAGC GCGCCGACGA CGCCTATGCC GCGGTCATGA TCGCCGACGA GGCGCTCAAG
CTCGCGCCGA ACGCGACCTG GGCCTCGCAC GCCGTGCTCG GCTTCCGCTG CGCCCAGGGC
GACTGGAACG GCGCGCTGGC CATCCTCGAC AGCAACTACA CCGCCGGCAT GATCGACAAG
CCGACCTATC GCCGCCAACG TGGCGTGCTG CTGACCGCGC GCGCCATTGC GCTGGAAACC
GAGAACCGCG ATCTGGCCCG CGCGAGCGCG ATGGAGGCGG TGAAGCTGGC CCCGACGCTG
ATCCCGGCCG CGGTGCTGGC GGCAAAATTC GAAAGCGAGG CCCACCAGGT GCGCCGCGCG
ATGAAGATCA TCGAGGCGGC CTGGACCGCC GGCCCGCATC CCGACCTCGC CGACGCCTAT
GCCCATGTGC GGCTCGGCGA TTCGGCGCGG CAGCGGCTCA CGCGGATCGA GAACCTCGCC
GCCCGCACGC GGGATCATAT CGAGGGCGCG CTGGCGATCG CTCGCGCGGC GATCGACGCC
GCCGAGTTCG GCCGCGCCCG CGCCGCGCTG GCGCCGTTCA CCGACGACCC GACCCAGCGC
GTGGCGATGC TGATGGCCGA GTTGGAGCGA ACCGAGCACG GCGACGCCGG CAAGTCACGC
GAATGGACCC TGCGCGCGGT GCGCGCCCGC CACGACCCGG CCTGGACCGC GGACGGCTAT
GTCAGCGACC ATTGGCGGCC GATCTCGCCG GTGACCGGCC GGCTCGACGC CTTCCAATGG
CAGACCCCGG TCGCCAGCCT GCCGTCGGAG CGCAACAGCG TCATCGAGAG CTCCGAATTC
GCCGATGCGG TGCTGGCGCC GCCGACCCGC GCCACTATTC CCGAAGGCCT GGCCGAGCCG
CCGCGCGAGG TCGCCCGTCA GAGTCAGCTG GACGTGATCG CGCCGACCCC GCAGGACAAC
GTTCCGCCGC GGCCCGCCGA GACCGCGGTG TCCGACCCGG CTGTGGACAC ACCTGTGCAA
GAGGCCGTTG ATAAGCCTGT CGACAGGCCG GTGGATAACC CTGTTGAGAA GACTGAGGAC
AACCGGCTGA TCGAGGTGAG TAGCGCGACG CCGGCCGAGC CGGCGCCGCC GCTGCAGGCG
TCCGGACCGA CCGATGCCGA TAGCGAGACG CCCGAGGCCG AGCGGGACGA GGCGGAGAGC
GAGGCCGAGG CGCCTGCCAA GCCGGCCGAC CCGGTGGCGA CCGCGCCGAC GCCGCTGTTC
CGCACCCGCA GCGATCTCGG CAAGCCGCCG GAGACACCGC TCCAGACGAT CGTTCCGATC
ATGCGGCCCC CCGATGATCC CGGCGTCGAC GACGAAGATC AGACGCGCGA CGAGTTTGCC
GAGCAGATCG CGCCCAAGGC GCAGGCCGGC GGCTGGCGCG GCTTCTGGTC GCGCTTCGGG
AGCTAG
 
Protein sequence
MLRIVVFLIL VGLAAAGSAW VAEQTGDVVL NWGPWRIAMT LPVFVLALGL TITACVLVWN 
LISALLRAPG RIRNHHRARR HQRGRHAITH GLLAIGHGDL TAARQHADAA KRLAGDDPLT
LLLHAQAAQL GGDRDGAQRA FRAMAERHDT RLLGLRGLFI EAQRADDAYA AVMIADEALK
LAPNATWASH AVLGFRCAQG DWNGALAILD SNYTAGMIDK PTYRRQRGVL LTARAIALET
ENRDLARASA MEAVKLAPTL IPAAVLAAKF ESEAHQVRRA MKIIEAAWTA GPHPDLADAY
AHVRLGDSAR QRLTRIENLA ARTRDHIEGA LAIARAAIDA AEFGRARAAL APFTDDPTQR
VAMLMAELER TEHGDAGKSR EWTLRAVRAR HDPAWTADGY VSDHWRPISP VTGRLDAFQW
QTPVASLPSE RNSVIESSEF ADAVLAPPTR ATIPEGLAEP PREVARQSQL DVIAPTPQDN
VPPRPAETAV SDPAVDTPVQ EAVDKPVDRP VDNPVEKTED NRLIEVSSAT PAEPAPPLQA
SGPTDADSET PEAERDEAES EAEAPAKPAD PVATAPTPLF RTRSDLGKPP ETPLQTIVPI
MRPPDDPGVD DEDQTRDEFA EQIAPKAQAG GWRGFWSRFG S