Gene BBta_0260 details

Gene Information

• Locus tag: BBta_0260
• Symbol: typA
• ID: 5151916
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: +
• Start bp: 265312
• End bp: 267138
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640555284
• Product: GTP-binding protein typA/bipA (tyrosine phosphorylated protein A)
• Protein accession: YP_001236461
• Protein GI: 148251876
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.181812
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 0.792051
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATCTTC GCAACATCGC CATCATCGCC CACGTCGACC ACGGCAAGAC CACGCTCGTC 
GACCGTCTCC TGCAGCAGTC AGGTACCTTC CGCGAGAACC AGAAGGTCGC CGAGCGTGCC 
ATGGACTCCA ACGATCTGGA GCGCGAGCGC GGCATCACCA TCCTGGCCAA GGCCGCCTCG 
GTGCAGTGGA AGGACACCCG CATCAACATC GTCGACACCC CCGGCCACGC CGATTTCGGC 
GGCGAGGTCG AGCGCATCCT GAACATGGTG GATGGCGCGC TGGTGCTGGT CGACGCCGCC 
GAGGGCCCGC TGCCGCAGAC CAAGTTCGTG GTCTCCAAGG CGCTCAAGGT CGGCCTCAAG 
CCGATCGTGG TCATCAACAA GGTCGACCGT CCCGACGCCC GCCCGACCGA GGTCATCAAC 
GAGGTGTTCG ACCTGTTCGC CGCGCTCGAC GCCAGCGAGG AGCAGCTCGA CTTTCCGATC 
CTGTACGGCT CGGCCAAGCA GGGCTGGATG GCCGACAGCC CGGAAGGTCC GCAGGACCGT 
GGCATGGAGC CCTTGTTCGA GCTGGTGCTG CGCCACGTCC CGCCGCCGAA GACCGAGGAG 
GGGCCGTTCC GCATGATCGG CACCATCATC GAGGCCAATC CCTATCTCGG CCGCATCATC 
ACCGGCCGCA TCACCTCCGG CACGCTCAAG CCGAACCAGC AGGTCAAGGT GCTGGCCGCC 
GATGGCAAGA TGATCGAGCA GGGGCGTATC ACGAAGATCT TGGCGTTCCG CGGCCTCGAG 
CGCACGCCGC TCGATGACGC CGAGGCCGGC GACATCGTCG CCATCGCGGG CCTGACCAAG 
GGCACCGTCG CCGACACCTT CTGCGATCCC TCGGTGGAGA CGCCGCTGCC GGCGCAGCCG 
ATCGATCCGC CGACCGTGTC GATGTCCTTC ATCGTCAACA ACTCGCCGCT GGCCGGCACC 
GAGGGCGACA AGGTCACCAG CCGCATGATC CGCGACCGCC TGCTGCGCGA GGCCGAGGGC 
AACGTCGCCC TGCGTGTCCG CGAGGCCGAC GACAAGGACG CGATGGAAGT GTCCGGCCGC 
GGCGAATTGC AGCTCGCGAT CCTGATCGAG ACCATGCGCC GCGAAGGCTT CGAGCTGTCG 
GTGTCGCGTC CGCGCGTCGT GTTCCAGAAG GATCCGGCGA CCGGCCAGAC CCTGGAGCCG 
ATCGAGGAGG TCGTGATCGA CGTCGACGAG GAGCATTCCG GCGTCGTCGT GCAGAAGATG 
AGCGAACGCC GCGCCGAGTT GATCGAGATG AAGCCATCCG GCGGCAACCG CCAGCGCCTG 
GTGTTCTACG CACCGACCCG CGGCCTGATC GGCTATCAGG GCGAACTGCT GACCGACACC 
CGCGGCACCG CGATCATGAA CCGCCTGTTC CACAACTACG CGCCCTACAA GGGCGAGATC 
CAGGGCCGCC GCAACGGCGT CCTGATCTCC AACGACCAGG GCGAGGCGGT GGCCTACGCC 
ATGTTCAAGC TGGAAGACCG CGGCCCGATG ATGATCGAGC CGGGCTGGAA GGTCTATCGC 
GGCATGATCG TCGGCGAGCA CACCCGCGAC AATGATCTCG AGATCAACGT TCTGAAGGGC 
AAGCAGCTCA CCAACATCCG CACGACGTCG AAGGACGAAG CGGTACGCCT GACCCCGCCG 
ATCAAGATGA CGCTTGAAAA GGCGCTGGCC TATATCGAGG ACGACGAGCT CGTCGAGGTC 
ACGCCGAAGT CGATCCGCCT GCGCAAGAAG CATCTCGATC CCAACGAGCG CAAGCGCGCC 
GAGAAGCAGA AGGAGGCGGT GGCGTAA 

 

Protein sequence

MNLRNIAIIA HVDHGKTTLV DRLLQQSGTF RENQKVAERA MDSNDLERER GITILAKAAS 
VQWKDTRINI VDTPGHADFG GEVERILNMV DGALVLVDAA EGPLPQTKFV VSKALKVGLK 
PIVVINKVDR PDARPTEVIN EVFDLFAALD ASEEQLDFPI LYGSAKQGWM ADSPEGPQDR 
GMEPLFELVL RHVPPPKTEE GPFRMIGTII EANPYLGRII TGRITSGTLK PNQQVKVLAA 
DGKMIEQGRI TKILAFRGLE RTPLDDAEAG DIVAIAGLTK GTVADTFCDP SVETPLPAQP 
IDPPTVSMSF IVNNSPLAGT EGDKVTSRMI RDRLLREAEG NVALRVREAD DKDAMEVSGR 
GELQLAILIE TMRREGFELS VSRPRVVFQK DPATGQTLEP IEEVVIDVDE EHSGVVVQKM 
SERRAELIEM KPSGGNRQRL VFYAPTRGLI GYQGELLTDT RGTAIMNRLF HNYAPYKGEI 
QGRRNGVLIS NDQGEAVAYA MFKLEDRGPM MIEPGWKVYR GMIVGEHTRD NDLEINVLKG 
KQLTNIRTTS KDEAVRLTPP IKMTLEKALA YIEDDELVEV TPKSIRLRKK HLDPNERKRA 
EKQKEAVA