Gene BBta_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0254 
Symbol 
ID5151696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp261858 
End bp263273 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content63% 
IMG OID640555278 
Producthypothetical protein 
Protein accessionYP_001236455 
Protein GI148251870 
COG category[R] General function prediction only 
COG ID[COG1964] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0356803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC CGCTGCGTAA GTCACGCCCC TATGTGTTCT GGGGACAGAC CCAATCCCTG 
TGCGAGACCT GCCTCGCGCT GGTGCCGACC AAGATCCAGA TCCAGGACAA CGAGGTCTGG
TACGAGAAGC GCTGCAAGGC GCACGGCGTG CAATCGACGC TGGTCTCCGA TGACGCAGCC
TATTGGCGGC GCTGCAAGGC GTTCATCAAG CCGGGCGATA CGCCGCTCAG TTTCCAGCGC
CGCACCGAAT ATGGCTGCCC CTATGATTGC GGCCTGTGCC CGGACCACGA GCAGCATTCC
TGCCTGGCGC TGATCGAGAT CACCGATCAC TGCAACCTGA CCTGCCCGGT GTGTTTCGCC
GAATCCTCGC CGCAGCGCTC GCATTTCACG CCGCTCGCCA CGGTCGAGCG GATGCTGGAC
GCGCTGGTGA AAAGCGAGGG CGAGCCGGAC TTGGTGCAGA TCTCCGGCGG CGAGCCGACC
TTGCATCCTG ATTTCTTCGA CATCCTGGCC GCCGTGCGCG CGCGGCCGAT CCGTCACGTT
ATGATCAACA CCAACGGCCT GCGCATCGCG CGCGAGCCGG ACTTCGTCGC GAAGCTCGCG
GAGACCAAGC GTGGGCTCGA GGTCTATCTG CAGTTCGACT CGCTGTCGCG CGCCGGTCTC
ACGAACATTC GCGGCGCCGA TTTGCGCCGC ATCCGCCAGC AGGCGCTGGA GAACCTCGAA
CATCAGGGCA TCTCGACCAC GCTGGTCGCG ACCATCAAGC GCGGGGTCAA TGACGACGAG
ATCGGCGACA TCGTGCGTCA TGCCTTGGAA TGGCGCTGCG TGCGCGGCGT CACCTTGCAG
CCGGTGCAGG ACGCCGGCCG CAATGCCGAC TTCGACAAGG ACACCGATCG CATCATGCTG
TCGGAGATCC GCCGCCGCGT CGTCGAGACC GGCGTGTTCG GCGAGCAGGA CATGATCCCG
CTGCCCTGCA ATCCCGAGAG CATCTCGATC GGCTATGGCC TGCGCAACGG CACAACCGTG
CTGCCCCTCA CCGCGATGGT GCCGCAGGAG GAGCTGCTGT CGGTGATGCC GAACACGATC
AGTCCGGAAA AATATCCGGT GCTGCGTGAC AAATTCGTCG AGCTGTTCTC GCTGTCGTCG
GGGCCGCTCA ATACCAGCGA GCGTGTCGCC GAATTCCTCT GCTGTTTGCC ATCCGTGCAG
GTGCCCGACA ATCTCGGCTA CGAGCACGTC TTCCGCGTCA CCATCGTGCA GTTTCTCGAC
CGCTTCAATT TCTGCGTCGG CAACGTCAAA CGCTCCTGCA TCCATTTCGT CACCGAGCGC
GGCGAGATCA TCCCGTTCGA CACCTACAAT CTGTTCTATC GCAACGGCGC CATCGACGGC
ATCCGAGCCC GGCTGGCGAA GGGTGAACAG GCGTGA
 
Protein sequence
MNAPLRKSRP YVFWGQTQSL CETCLALVPT KIQIQDNEVW YEKRCKAHGV QSTLVSDDAA 
YWRRCKAFIK PGDTPLSFQR RTEYGCPYDC GLCPDHEQHS CLALIEITDH CNLTCPVCFA
ESSPQRSHFT PLATVERMLD ALVKSEGEPD LVQISGGEPT LHPDFFDILA AVRARPIRHV
MINTNGLRIA REPDFVAKLA ETKRGLEVYL QFDSLSRAGL TNIRGADLRR IRQQALENLE
HQGISTTLVA TIKRGVNDDE IGDIVRHALE WRCVRGVTLQ PVQDAGRNAD FDKDTDRIML
SEIRRRVVET GVFGEQDMIP LPCNPESISI GYGLRNGTTV LPLTAMVPQE ELLSVMPNTI
SPEKYPVLRD KFVELFSLSS GPLNTSERVA EFLCCLPSVQ VPDNLGYEHV FRVTIVQFLD
RFNFCVGNVK RSCIHFVTER GEIIPFDTYN LFYRNGAIDG IRARLAKGEQ A