| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0230 |
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| Symbol | sdhA |
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| ID | 5150481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 234894 |
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| End bp | 236729 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640555255 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001236432 |
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| Protein GI | 148251847 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.153031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCG GAGCAAATGG CAGCGCGAAC GGCGCGCCCG CGACGAACGG AAAAGCCTAT
CCGATCGAGG ACCACACCTA CGACGTCGTC GTGGTCGGCG CAGGCGGTGC CGGACTGCGC
GCGGTGGTCG GCTGCAGCGA AGCGGGCCTG CGCACGGCCT GCATCACCAA GGTGTTCCCG
ACCCGCTCGC ACACCGTGGC GGCGCAGGGC GGCATCTCGG CCTCGCTCGG CAACATGCAC
CAGGACGACT GGCGCTGGCA CATGTACGAC ACCGTCAAGG GGTCGGACTG GCTCGGCGAC
CAGGACGCGA TCGAATACAT GGTGCGCAAT GCGCCCGACG CGGTCTACGA GCTCGAACAT
TGGGGCGTGC CGTTCTCGCG CACCGAAGAC GGCAAGATCT ATCAGCGTCC GTTCGGCGGC
ATGACCATCG ACTTCGGCAA GAGCCAGGCG CAGCGCACCT GCGCCGCCGC CGACCGTACC
GGCCACGCCA TGCTGCACAC GATGTATGGC CAGTCGCTGC GCCACGCCGC GGAGTTCTTC
ATCGAGTTCT TCGCCATCGA CCTGATCATG GACGACCAGG GCGTCTGCCG CGGCGTCATC
GCGCTGAAGC TCGACGACGG CACGCTGCAC CGCTTCCGCG CCCAGACCAC GATCCTGGCC
ACCGGCGGTT ACGGCCGCGC CTACGCGTCC TGCACCTCGG CGCATACCTG CACCGGAGAC
GGCGGCGGCA TGGCGCTGCG CGCCGGCCTG CCACTGCAGG ACATGGAATT CGTGCAGTTC
CACCCCACTG GCATCTATGG CTCGGGTTGT CTGGTCACCG AGGGTGCACG CGGCGAAGGC
GGCTATCTCG TCAACGCCGA GGGCGAGCGC TTCATGGAGC GCTATGCGCC GTCCGCCAAG
GACCTCGCCT CGCGCGACGT CGTCTCGCGC GCGATGACCA TCGAGATCCG CGAAGGCCGC
GGCGTCGGCA AGAAGAAGGA CCACATCTTC CTGCATCTCG ACCATCTCGA TCCGAAGGTG
CTGGCCGAGC GTCTGCCGGG CATCTCCGAA TCGGCCAAGA TCTTCGCCAA TGTCGACGTG
ACCCGCGAGC CGATCCCGAT CGTGCCGACG GTGCACTACA ACATGGGCGG CATCCCGACC
AACTATCACG CCGAGGTGCT GACCAAGAAG GACGGCGACG ACAACGCCAT CGTGCCCGGC
CTGATGGCGG TGGGCGAGGC GGCCTGCGTC TCCGTGCACG GCGCCAACCG GCTCGGCTCG
AACTCGCTGA TCGACCTCGT CGTGTTCGGA CGCGCTGCCG CGCTGCGGCT CGCGGAGAAG
CTGACGCCGA ACGGCAAGCA GCCGGATCTG CCGAAGGACT CGGCCGACAT GGCGCTCAGC
CGGCTCGACC GTTATCGCTA CGCCTCCGGC GGCACGCCGA CGGCGAAGCT GCGCGAGAGC
ATGCAGCATG TGATGCAGAC CAACTGCGCC GTGTTCCGCA CCGGCGAAGT GCTGCAGGAA
GGCCACAACC TGATCCACAA GGTCCATGGC GGCATCGGCG ACATTGCCGT CTCCGACCGT
TCGCTGGTGT GGAATTCCGA CCTGATCGAG ACCTTGGAGT TCGACAATCT GATCGCCCAG
GCGGTGGTCA CGATGGACTC CGCCGCCAAT CGCACCGAGA GCCGCGGCGC GCATGCCCGC
GAGGACTTCC CGGATCGCGA CGACAAGAAC TGGATGAAGC ACACGCTGGC GTGGATCGAC
CAGAACGGCC AGACCACGAT CGATTACCGC CCGGTGCACA ACTACACCAT GACCAACGAC
GTGCAGTACA TCCCGCCGAA AGCGCGTGTG TACTGA
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| Protein sequence | MAGGANGSAN GAPATNGKAY PIEDHTYDVV VVGAGGAGLR AVVGCSEAGL RTACITKVFP
TRSHTVAAQG GISASLGNMH QDDWRWHMYD TVKGSDWLGD QDAIEYMVRN APDAVYELEH
WGVPFSRTED GKIYQRPFGG MTIDFGKSQA QRTCAAADRT GHAMLHTMYG QSLRHAAEFF
IEFFAIDLIM DDQGVCRGVI ALKLDDGTLH RFRAQTTILA TGGYGRAYAS CTSAHTCTGD
GGGMALRAGL PLQDMEFVQF HPTGIYGSGC LVTEGARGEG GYLVNAEGER FMERYAPSAK
DLASRDVVSR AMTIEIREGR GVGKKKDHIF LHLDHLDPKV LAERLPGISE SAKIFANVDV
TREPIPIVPT VHYNMGGIPT NYHAEVLTKK DGDDNAIVPG LMAVGEAACV SVHGANRLGS
NSLIDLVVFG RAAALRLAEK LTPNGKQPDL PKDSADMALS RLDRYRYASG GTPTAKLRES
MQHVMQTNCA VFRTGEVLQE GHNLIHKVHG GIGDIAVSDR SLVWNSDLIE TLEFDNLIAQ
AVVTMDSAAN RTESRGAHAR EDFPDRDDKN WMKHTLAWID QNGQTTIDYR PVHNYTMTND
VQYIPPKARV Y
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