Gene BBta_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0215 
SymbolrplT 
ID5151148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp223182 
End bp223541 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content64% 
IMG OID640555240 
Product50S ribosomal protein L20 
Protein accessionYP_001236418 
Protein GI148251833 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.901812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGCG TCAAACGCGG TGTGACCGCC CACGCCAAGC ACAAGAAAGT CTTCAAGGCC 
GCCAAGGGCT ATTACGGCCG CCGCAAGAAC ACGATCCGCA CCGCCAAGCA GGCCGTCGAG
AAGGCTGGCC AGTATGCGTT CCGCGATCGC AAGCGCAAGA AGCGCACTTT CCGCGCGCTC
TGGATCCAGC GCCTGAACGC CGCCGTGCGT CCGTTCGAGC TCACCTACAG CCGATTTATC
GACGGCCTGT CCAAGTCTGG CATCACCGTC GACCGCAAGG TGCTGTCGGA TCTCGCGATC
AACGAGCCCG CCGCGTTCCA GGCGATCGTT GAGAAGGCCA AGGCGGCGCT CGCCGCCTGA
 
Protein sequence
MSRVKRGVTA HAKHKKVFKA AKGYYGRRKN TIRTAKQAVE KAGQYAFRDR KRKKRTFRAL 
WIQRLNAAVR PFELTYSRFI DGLSKSGITV DRKVLSDLAI NEPAAFQAIV EKAKAALAA