| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0204 |
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| Symbol | |
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| ID | 5150413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 209016 |
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| End bp | 210635 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640555229 |
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| Product | putative multidrug resistance protein |
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| Protein accession | YP_001236407 |
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| Protein GI | 148251822 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAC CGGCGACGCC GCAGGAGACG CCAGGCCTCG CCACTTGGCT CGGCTTCATC
CTGATGTGCG TCGGCATGTT CATGGCGATC CTGGACATCC AGGTGGTGGC GACGTCACTG
CCGACGATCC AGGAAGCGCT CGGCATCACG CCGGACGCCA TGAGCTGGGT CCAAACCGCG
TATCTGATCG CCGAGATCAT CGCCATTCCG CTGACCGGCC TGCTCACCCG CGTCTTCAGC
CTGCGTTGGC TATTCGTCGG CGCCGTCAGC ATCTTCACGG CGGCCTCGCT CGGCTGCGCG
ATGAGCGGCA GCTTCCACAT GCTGCTGGCG TTCCGCGTGC TGCAGGGCTT CTTCGGCGGC
CTGTTGATCC CCGTGGTGTT CTCGGCGGTG TTCCTGCTGT TTCCGGCGCG GCTGCACGCG
GTCGCAACCA CGATCGGCGG CGTGGTTGCC GTGCTCGCGC CGACCATCGG CCCCGTCGTC
GGCGGCTTCA TCACCAACAC CTGGTCGTGG CCCTGGCTGT TCCTGATCAA CATCGTGCCG
GGCATCATCG CTGCGCTGAT GACGCCGAGC CTGCTGCCGA AGCAGCGGAT GAATCTCATC
GAGCTCGACA AGCTCGACCT GCTGGCGCTG ATGCTGCTCG CGGTGTCGCT GGCGAGCCTC
GAACTCGGCC TGAAGGAGGC CCCCAAGGGC GGCTGGCTCT CGTCGAACTG CATCGCGCTG
CTGGTGCTGA GCGGATCCTG CCTGACTCTG CTGATCCAGC GGCTGCTGGC TTCGCCGCAT
CCGATCCTGC GGCTCGGCAG CTTTCAGCGC CGCTCGTTCA CGCTCGGCTG CGTGTCGAGC
TTCTGTCTCG GCATCGGCCT GTTCGGCTCG GTCTATCTGA TGCCGGTGTT CCTCGCCTTC
GTGCGCCAGC ACGATGCGTT CGAGATCGGC AAGATCATGC TGGTGACTGG GGTGGCGCAA
CTGATCGCAG CGCCGCTGGT GACAGCGCTG GACGGCAAGG TCGATGCCCG GCTGCTGACC
TCGTTCGGCT TCGCGCTGTT CAGCGCCGGC CTTGCCGCTA GCGCGTTCCA GCCGGCCAGT
GCGGACTATC AGGAAATGTT CTGGCCGCAG GTGGTGCGCG GTGTCGGCAT CATGTTCTGT
CTGTTGCCGC CGACGCGGAT CGCGCTCGGC GATCTGCCGC AGGCCGAGGT CGCCGACGCC
AGCGGCCTGT TCAACCTGAT GCGCAATCTC GGCGGCGCGA TCGGCATCGC TCTGATCGAC
ACGATCATCT ACGGCCGCGT CGGGCTGCAT GCCCAGGCAT TCCGCGACCG GCTGATGGCT
GGCGACACCG CGGCCGCCAA GGCGATCGGA TTGGCCCCGG AGCTGTTGCG CAACCGGCCG
CGCGGCGTGT CCGAGGAAGC CGCGATCGCC TATGTCCGGC CGCTGGTGGA GAAGGCGTCG
CTGGCGCTAT GCGTCAACGA GGCCTGGGCG CTGCTTGCCG GCGTTGCGCT GCTCGGCTTC
ATTCTCATTC CTTTTGCCCG CAACAGGACC GAGAGCCCAT CGCCGCGGCG GCTGGCCCTA
GAGGCTGCGC AGCCGGCGCT CCGACGACGG CTCGATCAGC TCGGGCCGCG GTCCGGATAG
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| Protein sequence | MSAPATPQET PGLATWLGFI LMCVGMFMAI LDIQVVATSL PTIQEALGIT PDAMSWVQTA
YLIAEIIAIP LTGLLTRVFS LRWLFVGAVS IFTAASLGCA MSGSFHMLLA FRVLQGFFGG
LLIPVVFSAV FLLFPARLHA VATTIGGVVA VLAPTIGPVV GGFITNTWSW PWLFLINIVP
GIIAALMTPS LLPKQRMNLI ELDKLDLLAL MLLAVSLASL ELGLKEAPKG GWLSSNCIAL
LVLSGSCLTL LIQRLLASPH PILRLGSFQR RSFTLGCVSS FCLGIGLFGS VYLMPVFLAF
VRQHDAFEIG KIMLVTGVAQ LIAAPLVTAL DGKVDARLLT SFGFALFSAG LAASAFQPAS
ADYQEMFWPQ VVRGVGIMFC LLPPTRIALG DLPQAEVADA SGLFNLMRNL GGAIGIALID
TIIYGRVGLH AQAFRDRLMA GDTAAAKAIG LAPELLRNRP RGVSEEAAIA YVRPLVEKAS
LALCVNEAWA LLAGVALLGF ILIPFARNRT ESPSPRRLAL EAAQPALRRR LDQLGPRSG
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