| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0189 |
|---|
| Symbol | |
|---|
| ID | 5150829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 194835 |
|---|
| End bp | 195548 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640555214 |
|---|
| Product | putative pyrazinamidase/nicotinamidase |
|---|
| Protein accession | YP_001236392 |
|---|
| Protein GI | 148251807 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGAC GAGGGATTTT GGCCGGTCTC GGTGCGACGG CGCTGATGTC AGCGCTTCCC
GCCCGCGGCT GGGCAGCGGC ATCAATCAAG CCGGACGAGA CATCGGCGCT GCTCGTGATC
GACGTGCAGA ATTTTTTCCT GCCCGGCGGC AGCCTCGCCG TAAAGGACGG CGAGCAGGTC
GTTCCGATCA TCAACCGGAT CGCGAAGGCC TTCAGCAATG TAGTTCTGAC GCAGGACTGG
CACACGCCTG CGCACGTCTC TTTCGCTTCC AGCCACGCCG GAAAGAAGCC ATTCGAGCTG
GTCGACCTCG CTTACGGCAA GCAGGTGCTG TGGCCGGACC ATTGCGTGCA GGGCACCGAG
GGAGCGGCGC TCTCCAAGGA TCTCGCGATC CCGCAGGCCG AGCTCATCAT CCGCAAGGGC
TTTCACAACG CGGTCGACAG CTACTCGGCT TTCACCGAGG CCGATGGCAA GACCACCACG
GGTCTCGCCG CCTATCTGCA GGCGCGTGGC ATCACCCGCG TCTTCGTTGC CGGACTGGCG
ACCGATTTCT GCGTCGCCTG GACTGCGCTC GATGCCCGCA AGGCAGGACT GGAGACTTAT
GTCGTCGAGG ACGCCTGCCG CGGCATCGAC ACCCAGGGGT CGCTGGCCAA GGCATGGACC
GACATGGCGG CGGCCGGCGT CAAGCGGATC AGTTCCGAGG ATATCGCGGC ATAG
|
|---|
| Protein sequence | MDRRGILAGL GATALMSALP ARGWAAASIK PDETSALLVI DVQNFFLPGG SLAVKDGEQV
VPIINRIAKA FSNVVLTQDW HTPAHVSFAS SHAGKKPFEL VDLAYGKQVL WPDHCVQGTE
GAALSKDLAI PQAELIIRKG FHNAVDSYSA FTEADGKTTT GLAAYLQARG ITRVFVAGLA
TDFCVAWTAL DARKAGLETY VVEDACRGID TQGSLAKAWT DMAAAGVKRI SSEDIAA
|
|---|
| |