Gene BBta_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0185 
Symbol 
ID5149121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp191334 
End bp191978 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID640555210 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_001236388 
Protein GI148251803 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGCA GCCATCGCAA GCTCAGCGGT CGCATCGTCA TCGCGACCCA CAATCCCGGC 
AAGCTGGCCG AGATGCGCGA GCTGCTGGCC CCCTACGGCG TCGAGGCCGT ATCGGCCGGC
GAACTCAGCC TCGGCGAGCC GGACGAGACC GGCGAGACAT TCCAGGCCAA TGCACGAATC
AAGGCCGTGG CCGCCGCGGA CGCCGCGCAG TTGCCGGCCT TTGCCGATGA TTCCGGCATC
GTCGTCCATG CACTGGACGG CGCGCCGGGC ATCTACTCGG CCCGCTGGGC CGGGCCGGAC
AAGGATTTCA CGGCGGCGAT GACCCGGATC GAGCGTCTGC TGCAGGAGCG CGGTGCGACC
GGACCGGACA AGCGCGGCGC GCATTTCGTC TCGGCGCTGT GCGTCGCCTG GCCGGACGGG
CATGTCGAGG AGGTCGAGGC GCGCGTCGAC GGCACCTTGG TATGGCCGCC GCGCGGCTCC
GCCGGCTTCG GCTACGACCC GATGTTTCTG CCCGAAGGAC ATGATCGCAC CTTCGGCGAG
ATGACGAGTC TCGAGAAGCA CGGCCTGCCG CCGCTCGGCC TCGGCCTGTC GCACCGGGCC
CGCGCTTTCG TGAAGCTCGC GGAGATCTGC CTTGACCAGC GCTGA
 
Protein sequence
MSSSHRKLSG RIVIATHNPG KLAEMRELLA PYGVEAVSAG ELSLGEPDET GETFQANARI 
KAVAAADAAQ LPAFADDSGI VVHALDGAPG IYSARWAGPD KDFTAAMTRI ERLLQERGAT
GPDKRGAHFV SALCVAWPDG HVEEVEARVD GTLVWPPRGS AGFGYDPMFL PEGHDRTFGE
MTSLEKHGLP PLGLGLSHRA RAFVKLAEIC LDQR