Gene BBta_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0179 
Symbol 
ID5150807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp185303 
End bp186118 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID640555204 
Productputative exodeoxyribonuclease III (xthA) 
Protein accessionYP_001236382 
Protein GI148251797 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.59766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTCG TCCTGACCAC CTGGAACATC AATTCGGTGC GCCTGCGCAT CGACCTCGTC 
GCCAAGCTCA TCAAGCAGGT CAGGCCCGAT GTGCTGTGCC TGCAGGAGAC CAAGTGCATC
GACGACGCCT TTCCGCTGAA GCGATTCAAG CGGCTCGGCT ATGAGCATAT CGCGCTGAAC
GGCCAGAAGG GCTATCACGG CGTCGCCGTG ATTTCGAAAT GGCCGTTCGA CAGCACCGGC
GTCAGGACGT TCTGCGACAA GGTGGATTCC CGGCATATTT CGGTGGCCTT CGGCGAGAAG
GCGCAGCTGG CCCGGCCGCT GGTGCTGCAT AATTTCTACG TGCCTGCCGG CGGCGACATT
CCCGACCCCG CGCTCAATCC GAAATTCGAG CACAAGCTGC AATTCCTCGA CGAGATGAAA
GCGTGCGAGC CGTTGCACCC GCGCGGCGAC GACCGCCACA TCCTGGTCGG CGACCTCAAT
GTCGCGCCTC ACGAGCACGA CGTCTGGTCG CATAAGCAGC TTCTGAAGGT GGTGTCGCAC
ACGCCGATCG AATGCGAGAA GCTGCTGGCG GCGCAGAGCC ACGGCGCATG GGTCGATGTC
GCCCGCGAGC GGATCCCGAT GTCGGAGAAG GTCTACACCT GGTGGAGCTA TCGCGCCGCC
GACTGGACCG TCGGGAATCG CGGCCGGCGG CTCGACCACA TCTGGGTGTC GCGCGCGCTG
AAGGACAATG TCACCGATTT CAGCATCCTG CGCGACGCCC GCAGCTGGGA GCGTCCGTCA
GATCATGTCC CGGTGACGGT GACGCTCGAC GTGTAA
 
Protein sequence
MRLVLTTWNI NSVRLRIDLV AKLIKQVRPD VLCLQETKCI DDAFPLKRFK RLGYEHIALN 
GQKGYHGVAV ISKWPFDSTG VRTFCDKVDS RHISVAFGEK AQLARPLVLH NFYVPAGGDI
PDPALNPKFE HKLQFLDEMK ACEPLHPRGD DRHILVGDLN VAPHEHDVWS HKQLLKVVSH
TPIECEKLLA AQSHGAWVDV ARERIPMSEK VYTWWSYRAA DWTVGNRGRR LDHIWVSRAL
KDNVTDFSIL RDARSWERPS DHVPVTVTLD V