Gene BBta_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0176 
Symbol 
ID5149946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp183199 
End bp183720 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content71% 
IMG OID640555201 
Producthypothetical protein 
Protein accessionYP_001236379 
Protein GI148251794 
COG category[S] Function unknown 
COG ID[COG3786] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.754868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.876478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACTA CCACGATCCG GGTCCGGGCC GCCGCCGGGA ATCGGCGGCG CGGCTGGCTG 
ATCATGGAGG GACTGATCAT CCCCGTTGCC CTGGGCCGCG GCGGCATCCT GGCCAATAAG
CGCGAGGGCG ACGGCGGCAC GCCGCGCGGC CTCTTCCGGC CACGCCGGCT GTGGTGGCGG
GCCGACCGCC ACCGGCGGCC GCAGACCCGG CTCCCCGTCC GTCCGATCGG CCCCGAGGAC
GCCTGGTGCG AGGATCCGGC CGATCGCCGC TACAACCGGC CGTTTCGGCT GGGCGGCGAT
CAGCCGGGGG ACCGGCTGGC GCGCAGCGAC CATCTCTATG ACTTCATCAT TGAGATCGAC
CACAACACGC GGCCCCGGAT CGCCGGACGG GGCAGCGCTG TGTTCCTGCA TTTGGCGCGG
CCGAATTTCG GCCCCACCGC CGGCTGCGTG GCCATGACCC GGTCGGCAAT GTTGCGGCTG
TTGCAAAGCA TCGGCCCGCG CACCAGGATC ATCATCGAAT GA
 
Protein sequence
MPTTTIRVRA AAGNRRRGWL IMEGLIIPVA LGRGGILANK REGDGGTPRG LFRPRRLWWR 
ADRHRRPQTR LPVRPIGPED AWCEDPADRR YNRPFRLGGD QPGDRLARSD HLYDFIIEID
HNTRPRIAGR GSAVFLHLAR PNFGPTAGCV AMTRSAMLRL LQSIGPRTRI IIE