| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0174 |
|---|
| Symbol | |
|---|
| ID | 5149944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 181658 |
|---|
| End bp | 182344 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640555199 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001236377 |
|---|
| Protein GI | 148251792 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.405099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.913317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAGATG CCCCGACCAG CTTCACCTCG TCTTCACCAT CCGCGCTCAC TGCAGTCGAG
CAGGAGATCC TGCGGGCGTG CCGCGACGCC AAACGCGAGC GAGCCTCGGT CACCTTGATC
GCCGTGTCCA AGACGTTTGC GGCGGATGCG ATCGAGCCGG TCATCGCGGC CGGCCAGCGC
GTGTTCGGCG AGAACCGGGT CCAGGAAGCC AAAGGAAAAT GGCCGGCGCT GATGGCGGCG
CATCCGGGGC TGTCGCTGCA TCTGATTGGG CCGTTGCAGT CCAACAAGGC CAAGGAGGCG
GTGGCGCTGT TTGACGCCAT TCATTCGGTG GATCGTCCGA GCCTGTGCGC CGCGCTCGCC
AAGGAAATTG CGGCGCAGAA CAGGCATCCG CAGCTGTTCG TTCAGATCAA CACCGGCGAG
GAGCCGCAAA AGGCCGGCAT CGCGCCCGGT GAAGCCGACG CGTTCGTGGC GGCCTGCCGC
AAGGATTATG GGTTGGAGAT TTCCGGCCTG ATGTGCATTC CGCCGGTCGA CGAGGCACCG
GGTCCGCATT TCGCGCTGAC CGCCAAGATC GCGGCGCGCA ACGGCCTTGC GAATCTGTCG
ATGGGCATGA GCGCCGATTT CGCCACGGCC ATTCAGTTCG GCGCCACGCA TGTGCGCGTC
GGCTCGGCGA TCTTCGGCCA TCGCTGA
|
|---|
| Protein sequence | MPDAPTSFTS SSPSALTAVE QEILRACRDA KRERASVTLI AVSKTFAADA IEPVIAAGQR
VFGENRVQEA KGKWPALMAA HPGLSLHLIG PLQSNKAKEA VALFDAIHSV DRPSLCAALA
KEIAAQNRHP QLFVQINTGE EPQKAGIAPG EADAFVAACR KDYGLEISGL MCIPPVDEAP
GPHFALTAKI AARNGLANLS MGMSADFATA IQFGATHVRV GSAIFGHR
|
|---|
| |