| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0139 |
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| Symbol | |
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| ID | 5149510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 145763 |
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| End bp | 148000 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640555164 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001236342 |
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| Protein GI | 148251757 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.233978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGCGA GTTTTCGCAT CAGGCTGCGG CTGCGCCGGT TCACACGCCG CCATCACACG
CTGTTTACGA TCCTGCGTTC GGCAATGATC TTCATGGCCG GGTTCGGCGG CGCCTATGGC
TTCATCAAGG CCAGCCTGTC CGAGACCTCC GGCTACAACC CGCACGCCTT CGCGATCGGC
GCGAGCTTTC TGTTTGCGCT CGCCTGCGTC GGGCTCGCGA CGCTCAGCAT GCGGCTGCGC
TTCATGCGCA AGAAAATGCA CAAGCTCGCG CTTCACAACG AGGTGCTGGC GGACCGCAAT
TGGGAGCTTC AGGAGGCCGA GCAGCGCGCC CGCAGCCTGT TCGAGCAACA AGGCGACCTG
ATCGTCATGC GCGAGAGCGA CGGCACGATC ATCTTCGTCA ACGACGCCTA TTGCCGGATG
GCCGGCCTCG ATCGCGAAAA CCTGCTCGGC AGCCAGTTCA GCTTCGATCT CCTCGAGCAA
GGCGACAGCG CGCTGGAGCC GAGCGGCACG CGCGTCCACG ACCAGCGGAT CGACAGCGCC
ATCGGGCCGC GCTGGATCGC TTGGCGCGAG GCGCTCGTGC GCTCCGATGC CGGACATCCG
GCCGTGCAGC AATGTGTCGG CCGCGACGTC ACCGACCGCA CAGAGACCGA GCGGGCGCTG
GCCGAGGCGC GCGACCAGGC TAATGCGGCG AACCGCGCCA AGTCGCGCTT CCTGGCGATG
GCCAGCCACG AGATCCGCAC ACCGTTGAAT GGCATCCTCG GCATGAGCGG GCTGCTGCTG
GAGACGCAGC TCACACCGGA GCAGACCACC TATGCCAAGG CCGTCCGCAG CTCGGGTGAA
GCGCTGATGT CGCTGATCAA CGAGCTGCTC GATTATTCCA AAATCGAGGC CGGCAAGCTG
GCCCTCGAGG CGCAGCCGTT CGCGCTGACC GCGCTGATCG AGGAGATCAC CGAGCTCCTG
GCACCGCGCG CGCAAGGTAA ACAGCTGGAG ATCGCGGCCT ATCTCGACGA GCGGCTGCCG
ACCTGGGTGA CCGGCGACGC CGCACGGCTG CGCCAGGTGC TGCTCAATCT CGCCGGCAAC
GCGATCAAGT TCACGAGCAA AGGCGGCGTG GCGCTGATTG CCGAGCCCGG CATCTGGCCG
AACGAGATCA GCTTCCAGGT GCGCGACACC GGCATCGGCA TCGCGGCTGA CGCGCAGGAG
CGAATTTTCC GCGAGTTCGA GCAGGCCGAC GACAGCGTCG CGCGCAGCTT CGGCGGCACC
GGTCTTGGGC TCGCGATCTC CGACCGCATC GTCAAGCGGA TGGGCGGACG CATCGCGCTG
CAGAGCCAGC CCGGCGCGGG CTCGACGTTC GAGGTGTCCG TGCCGCTGCC GCCGGCGCTC
GAGCGCGGCG AGCAGAACAG CTTTCGCGGC CCCGACCTGA CCGGACAGTC GATCATGCTG
ATCGCCCCGG CCGGCCTGCA GGCCGAGCTG ATCGAAAGGC GGCTGCAGAA TTGGGGCGCG
CAGACCTGCC TCGTCGCCGA GACCGAGATC GCCGCGGCGC TGCTGCCCGA GCGCGCCTGG
CACGCGGTCT TGATCGATGA CGCGATCGGC AGCGAGGCGG CGCGGCGTCT GGGCGAGGCT
GCACACCATC ATACGACGCG GCTGATCGTG CTGGTCACGC CGACGAGCCG GCACGAGCTG
GCCCCCGCCG CGCCCTTCAA CGGCTATCTG GTGAAGCCGT TGCGGGCCGC TTCGCTCGCC
GCGCGCGTCA GCTTCGACCT GGACGCAGGA GCGGCATTCG CCGAGCATCC GATTCCGACC
ATCGCACCAT CGATCGCGGC GCGGGCGGGC ACCGGGCTGG CGATCCTCGT CGCCGAGGAC
AACGATATCA ACGCGCTGCT GATGCGCTCA TTGCTGACCA AGCTCGGCCA TCACGCCGAT
ATCGCCGTGC ACGGCGAGGC TGCCCTGGAT TCCTGGCTCG CCGCCCGCGC GGCCGGCACG
CCCTATGATC TCATCCTGAT GGACGTGCAG ATGCCGCGGC TCGATGGCAT TGCCGCGACG
CGTCGCATTC GCGCCCATGA GGCCAGCGAG CCCGGCCGGC GCACGCCGAT CCTGGCACTC
ACCGCCAATG CCCTGGTCGA GGACCGCTAC GCCTGTTTCG AGGCGGGAAT GGACGGCTTC
CTGGTCAAGC CGATCGACCG CGACAAGCTG GATGAAGCGC TGGCCAATCT GGCGGCGGCG
CGGCAGGTGG CGGCGTAG
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| Protein sequence | MGASFRIRLR LRRFTRRHHT LFTILRSAMI FMAGFGGAYG FIKASLSETS GYNPHAFAIG
ASFLFALACV GLATLSMRLR FMRKKMHKLA LHNEVLADRN WELQEAEQRA RSLFEQQGDL
IVMRESDGTI IFVNDAYCRM AGLDRENLLG SQFSFDLLEQ GDSALEPSGT RVHDQRIDSA
IGPRWIAWRE ALVRSDAGHP AVQQCVGRDV TDRTETERAL AEARDQANAA NRAKSRFLAM
ASHEIRTPLN GILGMSGLLL ETQLTPEQTT YAKAVRSSGE ALMSLINELL DYSKIEAGKL
ALEAQPFALT ALIEEITELL APRAQGKQLE IAAYLDERLP TWVTGDAARL RQVLLNLAGN
AIKFTSKGGV ALIAEPGIWP NEISFQVRDT GIGIAADAQE RIFREFEQAD DSVARSFGGT
GLGLAISDRI VKRMGGRIAL QSQPGAGSTF EVSVPLPPAL ERGEQNSFRG PDLTGQSIML
IAPAGLQAEL IERRLQNWGA QTCLVAETEI AAALLPERAW HAVLIDDAIG SEAARRLGEA
AHHHTTRLIV LVTPTSRHEL APAAPFNGYL VKPLRAASLA ARVSFDLDAG AAFAEHPIPT
IAPSIAARAG TGLAILVAED NDINALLMRS LLTKLGHHAD IAVHGEAALD SWLAARAAGT
PYDLILMDVQ MPRLDGIAAT RRIRAHEASE PGRRTPILAL TANALVEDRY ACFEAGMDGF
LVKPIDRDKL DEALANLAAA RQVAA
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