Gene BBta_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0134 
Symbol 
ID5149462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp141438 
End bp142211 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content65% 
IMG OID640555160 
Producthypothetical protein 
Protein accessionYP_001236338 
Protein GI148251753 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCGG CCGTGGCGAC CTGTGTCCTG ACCCTTGCCG CCGGCCATGC GGCCGCCCAG 
ACCACGCCGG CGCCCAAATC GGGCCCCAAG GGCGGCGCCC AGCTCAGCGC CTCCGACCAG
CAGCGTGGCG GACAGGGCCC TGCGACCACC CAGACCACGC CGCCCAATCC GATCATTCCG
GATCCCCGGC GCAACGTGCC GGCCAGCATC TTCACCTCGT TCGACGCCAA TCAGAAGGCG
ATCGCGGGAA AGGTGAGCGC CTATCTGTCG TCATTGCAGA CGCTGGTCGG CAACTTCGTC
CAGGTCGGCC CGGACGGCAG CAAGACCAAG GGTGATTTCT ACATCCAGAA GCCCGGCAAG
GTGCGCTTCG AATATGATCC GCCGACGCCG ATCGACATCA TCGCCGACGG CTCATCGCTG
GTCGTGCGCG ACCGCAAGCT CGCGACCCAG GACGTCTACC CGCTGTCGCA GACGCCGCTG
CGCTATCTGC TGTCCGACCG GATCGACCTG CTCAAGGACA CCAATGTGAT CGCGGTCGCC
TCCGACGACC TCTATGTCAC GATCACGATC GAGGAGAAGC AGGCGCTGAT CGGCACCAGC
CGGCTGATGC TGATGCTCGG CGCCAAGGAC GGCCAGCTCA AACAGTGGAC CGTGACCGAT
CCGCAGGGCT ACGACACGAC GATCGCCGTC TACAATCTCG ATACGACCAA GAAGCTTGAT
CCGGCGATGT TCAAGATCGA CTTCACGACC TATCCGAGCA CGCCGCCGGG TTGA
 
Protein sequence
MVAAVATCVL TLAAGHAAAQ TTPAPKSGPK GGAQLSASDQ QRGGQGPATT QTTPPNPIIP 
DPRRNVPASI FTSFDANQKA IAGKVSAYLS SLQTLVGNFV QVGPDGSKTK GDFYIQKPGK
VRFEYDPPTP IDIIADGSSL VVRDRKLATQ DVYPLSQTPL RYLLSDRIDL LKDTNVIAVA
SDDLYVTITI EEKQALIGTS RLMLMLGAKD GQLKQWTVTD PQGYDTTIAV YNLDTTKKLD
PAMFKIDFTT YPSTPPG