| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0128 |
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| Symbol | |
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| ID | 5149239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 130257 |
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| End bp | 131228 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640555154 |
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| Product | putative TRAP-type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) |
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| Protein accession | YP_001236332 |
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| Protein GI | 148251747 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.356896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAC TTACAGGTAT CATCGCAGCC GCCGTGCTGG CGGTTTCGGC GCCGCTGGCG
ACCGCGCGCG ATTTCCGCTC CGCCGACGTG CACCCCGCCG ATTATCCGAC CGTCGAAGCC
GTGAAGTTCA TGGGCAAGCA GCTGGCCGCT GCGAGCGGCG GCAAGCTCGG CGTCAAGGTG
TTTCCGAACG GCGCCCTCGG CTCCGAGAAG GACACGATCG AGCAGCTCAA GATCGGCGCG
CTCGACATGA TGCGCATCAA CTCCTCGCCG CTGAACAACT TCGTCCCGGA GACCGTTGCG
CTGTGCCTGC CCTTCGTGTT CCGCGACACG CAGCACATGC GCAACGTGCT GGACGGCCCG
ATCGGCGACG AGATCCTGGC CGCGATGGAG CCCGCCGGCC TGGTCGGCCT CGCTTATTAT
GACAGCGGCG CGCGCTCGAT CTACACCGTC AAGGCGCCGG TCAAGTCGCT CGCCGACCTC
AAGGGCCTGA AGATCCGCGT CCAGCAGTCC GACCTCTGGG TCGGCATGAT CCAGAGCCTC
GGCGCCAACC CGACCCCGAT GCCCTATGGC GAGGTCTACA CCGCGCTCAA GACCGGCCTG
GTCGACGCCG CCGAGAACAA CTGGCCCTCC TACGAATCCT CGCGCCATTT CGAGGCCGCC
AAGTTCTACA ACATCACCGA GCACTCGCTG GCGCCCGAGG TCCTCGTGAT GTCCAAGAAG
GTCTGGGACA CGCTGAGCAA GGAGGACCAG GCGCTGGTCC GCAAGGCGGC CAAGGACTCG
GTGCCGGTCA TGCGCAAGCT CTGGGACGAG CGCGAGCAGG CCTCCCGCAA GGCCGTCGAG
GCCGCCGGGG TCCAGGTCGT GACGGTCGCC AACAAGCAGG AATTCGTCGA CGCGATGAAG
CCGGTCTACC AGAAGTTCGC GGGCGACGAG AAGCTCTCGA GCCTCGTCAA GCGCATCCAG
GACACGAAGT AA
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| Protein sequence | MKALTGIIAA AVLAVSAPLA TARDFRSADV HPADYPTVEA VKFMGKQLAA ASGGKLGVKV
FPNGALGSEK DTIEQLKIGA LDMMRINSSP LNNFVPETVA LCLPFVFRDT QHMRNVLDGP
IGDEILAAME PAGLVGLAYY DSGARSIYTV KAPVKSLADL KGLKIRVQQS DLWVGMIQSL
GANPTPMPYG EVYTALKTGL VDAAENNWPS YESSRHFEAA KFYNITEHSL APEVLVMSKK
VWDTLSKEDQ ALVRKAAKDS VPVMRKLWDE REQASRKAVE AAGVQVVTVA NKQEFVDAMK
PVYQKFAGDE KLSSLVKRIQ DTK
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