Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0111 |
Symbol | |
ID | 5149620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 115867 |
End bp | 117183 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640555139 |
Product | putative glycerol 3-phosphate transport protein, ugpB-like protein |
Protein accession | YP_001236317 |
Protein GI | 148251732 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.877787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTTC GCCAATTCGC TGCTGCCGCC GTGGTCACGG CGACCTTTGG TTTCGCTGTT TCTCCCGCAC ACGCGGTGAC TGAGATTCAG TGGTGGCACG CCATGACCGG CGGCAACAAC GACATCGTCA ACCGGCTCGC CGAGGAGTTC AACGCCTCCC AGAGCGACTA CAAGGTCGTG CCGACCTTCA AGGGCGCCTA TCCGGACACG CTGAATGCCG GCATCGCTGC GTTCCGCGCC GGCACCGCGC CGCACATCCT GCAGGTGTTC GAGGTCGGCA CCGCGACGAT GATGAGCGCC AAGGGCGCGA TCAAGCCGGT CTATGAGCTC ATGAAGGATG CCGGCGAGCC GTTCGATCCC AAGGCTTATC TGCCGGCGAT CACCGGCTAC TACTCGACGT CGAAGGGCGA CATGCTGTCG TTCCCGTTCA ACTCGTCCTC GATGGTGATG TGGATCAACA AGGATGAGCT GAAGAAGGCC GGCGTCGCCG AGATCCCGAA GACCTGGCCG GAGGTGTTCG ACGCGGCCAA GAAGCTGAAG GCGGCCGGAC ACGACACCTG CGGCTTCTCC AACGCCTGGG CATCCTGGGC CAATATCGAG CAGTTCTCGG CCTGGCACAA CGTGCCGATC GGCACCAAGG CCAACGGCCT CGACGGCTTC GACACGGTGC TCGAATTCAA CACCCCGCTG CACGTCAAGC ACCTGCAGAA CCTCGTCGAG CTGCAGAAGG ACAAGACCTA CGATTATTCC GGTCGCGGCA GCGCCAGCGA GAGCCGCTTC GGCTCCGGCG AATGCGCGAT CTTCCTGACC TCGTCGGGCT ATTACGCCAC TGCCAAGAGC ACCGCGAAGT TCGACTTCAC CTCGGCACCG ATGCCGTACT ACCCGGATGC ACCGGGCGCG CCGCAGAATT CGATCATCGG CGGCGCCTCG CTCTGGGTGA TGGGCGGCAA GTCGGCGGAC GAGTACAAGG GCGTGGCCAA GTTCTTCACC TTCCTGTCCG ACACCAACCG CCAGGCCAAG CTGCACCAGG AATCCGGCTA TCTGCCGATC ACCAAGGCGG CCTATGAGAA GACCAAGGCG GACGGCTTCT ATGAGAAGAA TCCGACCCTG CAGACGCCGC TGAAGGAGCT CACCAACAAG GAGCCGACCG AGAACTCGCG TGGCCTGCGC TTCGGCAACA TGGTGCAGAT GCGCGATGTC TGGGCCGAGG AGATCGAGGC GGCGCTGGCC GGCAAGAAGA CCGCCAAGGA CGCGCTCGAT TCCGCTGTCG CCCGCGGCAA TGCGATGTTG CGCACCTTCG AGAAAACGGC CAAGTAG
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Protein sequence | MSLRQFAAAA VVTATFGFAV SPAHAVTEIQ WWHAMTGGNN DIVNRLAEEF NASQSDYKVV PTFKGAYPDT LNAGIAAFRA GTAPHILQVF EVGTATMMSA KGAIKPVYEL MKDAGEPFDP KAYLPAITGY YSTSKGDMLS FPFNSSSMVM WINKDELKKA GVAEIPKTWP EVFDAAKKLK AAGHDTCGFS NAWASWANIE QFSAWHNVPI GTKANGLDGF DTVLEFNTPL HVKHLQNLVE LQKDKTYDYS GRGSASESRF GSGECAIFLT SSGYYATAKS TAKFDFTSAP MPYYPDAPGA PQNSIIGGAS LWVMGGKSAD EYKGVAKFFT FLSDTNRQAK LHQESGYLPI TKAAYEKTKA DGFYEKNPTL QTPLKELTNK EPTENSRGLR FGNMVQMRDV WAEEIEAALA GKKTAKDALD SAVARGNAML RTFEKTAK
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