Gene BBta_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0108 
SymbolohrR 
ID5149548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp113269 
End bp113727 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content65% 
IMG OID640555136 
Productorganic hydroperoxide resistance transcriptional regulator 
Protein accessionYP_001236314 
Protein GI148251729 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.879191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGA AATCCGCGGC CGATGTGCCG CTCCAGCTCG GCAACCAGCT CTGCTTCGCG 
GTCTATTCGA CGGCCCACGC CTTCAACCGC GTCTACAAGC CGCTGCTCGA CCGTCTCGGT
CTGACCTATC CGCAATATCT GGTCATGCTG GTGCTGTGGG AAAGGGATGG GCTGTCGGTG
AAGGAGATCG GCGAGCGGCT GTACCTCGAC TCGGGCACCC TGACGCCACT GCTGAAGCGG
ATGGAGGCGG CGCATCTGCT GAAGCGCACA CGTTCGGCAG CGGATGAGCG ACAGGTGCTG
GTCGCGCTGA CCGCGCAGGG CGCCGCGCTG CGAGACAAGG CCAAGGCCAT CATCCCGCCG
GCGATCCTCG ATGCCACAGG CTGCTCGCTC GCGGAGCTTG CCGACCTGCA TGGCAAACTG
GTGCGGCTGC GGGAACAACT GAATGCGGCG GCGGGGTGA
 
Protein sequence
MRKKSAADVP LQLGNQLCFA VYSTAHAFNR VYKPLLDRLG LTYPQYLVML VLWERDGLSV 
KEIGERLYLD SGTLTPLLKR MEAAHLLKRT RSAADERQVL VALTAQGAAL RDKAKAIIPP
AILDATGCSL AELADLHGKL VRLREQLNAA AG