Gene BBta_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0107 
Symbol 
ID5149547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp113010 
End bp113261 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content59% 
IMG OID640555135 
Producthypothetical protein 
Protein accessionYP_001236313 
Protein GI148251728 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.629422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTACG TCTACATCAT CCGTAGCGTA ACCTTTCCCG ACCAGGAATA TGTCGGCGCA 
ACCGCCGACC TGAGGCAGCG CCTCAAAGAT CACAACGCCG GCCGCTCGGC CCACACGTCC
AAATTCATGC CGTGGACATT GGTCTGGTAT TGCGCGCTTC CGGACAAGTC GAACGCGCTC
GCATTCGAGG CCTATCTGAA GTCGCATTCC GGGCGAGCGT TTTCGAAGAA GCGGCTTGTC
CGGCCGTGTT GA
 
Protein sequence
MWYVYIIRSV TFPDQEYVGA TADLRQRLKD HNAGRSAHTS KFMPWTLVWY CALPDKSNAL 
AFEAYLKSHS GRAFSKKRLV RPC