Gene BBta_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0105 
SymbolaroA 
ID5155296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp110712 
End bp112049 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content70% 
IMG OID640555132 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_001236311 
Protein GI148251726 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.783241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC CAGCCGCCCC GATCCCCCTC GAATCTCGCG CCTCAGGGCC GCTCTCGGGC 
ACCTTGCGCG TGCCCGGCGA CAAATCGATC TCGCACCGGG CGCTGATCCT GGGGGCGCTG
TCGGTGGGCG AGACGCGGAT TTCCGGGCTG CTCGAGGGCG AGGATGTCCT CAACACCGCG
CAAGCGATGC GGGCGCTCGG CGCGAAAGTC GAACGTCACG GCGACTTCGC CTGGACGGTG
CACGGCGTCG GCGTCGGCGG CTTTGCCCAG CCGGCGGCGA CGCTCGATTT CGGCAACTCC
GGCACCGGCT GCCGGCTGGT CATGGGCGCC GTGGCCGGCT GCCCGATCAC CGCGGTGTTC
GACGGCGATG CCTCGCTGCG CAGCCGCCCG ATGCGTCGCA TCCTCGATCC GCTGGAGCTG
ATCGGCGCCA AGGTGACCGC CAGCGCCGAG GGCGGCAAGC TTCCGTTAAC CCTGCAGGGC
GCCAGCAACC CGGTGCCGGT CGTGTATCGG ACGCCGGTGG CCTCGGCCCA GATCAAATCG
GCCGTGCTGC TGGCTGGCCT GGCGGCGCCC GGCGTCACCA CCGTGATCGA GCAGGAGGCC
AGCCGCGACC ATACCGAGCT GATGCTGAAG CATTTCGGCG CCGAGATCGT CACCACCCTG
GAAGGGACCC ATGGCCGCCG CATCGCGCTC ACCGGACAGC CGGAGCTGCA CGGCGCGCCG
GTCATCGTCC CGGCCGATCC GTCCTCGGCC GCGTTCCCGC TGGTCGCCGC CCTGATCGTC
GACGGCTCGG ATCTCGTGCT GTCGGATGTC ATGACCAATC CGCTGCGCAC CGGCCTGTTC
GCGACCTTGC GCGAGATGGG CGCCTCGATC GAAGAGGACG ATGTCCGCGG CGATGCCGGC
GAGCCGATGG TCCGCTTGCG CGTGCGGGCC TCGAAGCTGC GCGGCGTCGA GGTTCCGCCG
GAGCGGGCGC CGTCGATGAT CGACGAATAT CTCGTGCTGG CGGTGGCCGC CGCTTATGCC
GAGGGCACGA CCATCATGCG CGGCCTGCAC GAGCTTCGCG TCAAGGAATC CGACCGGCTC
GAGGCCACCG CAGCCATGCT GCGCGTCAAC GGCGTCAAGG TCGAGATCTC CGATGACGAT
CTGATCGTCG AGGGCCGCGG CCACGTGCCG GGCGGCGGGC TGGTCGCGAC CCATATGGAC
CACCGCATCG CGATGTCCGC TCTGGTGATG GGGCTCGCGT CGGACAAGCC GGTCAAGGTC
GACGACACCG CCTTCATCGC CACCAGCTTT CCGGACTTTG TTCCGCTGAT GTGCAAGGCA
GGGGCGGATT TCGCATGA
 
Protein sequence
MSAPAAPIPL ESRASGPLSG TLRVPGDKSI SHRALILGAL SVGETRISGL LEGEDVLNTA 
QAMRALGAKV ERHGDFAWTV HGVGVGGFAQ PAATLDFGNS GTGCRLVMGA VAGCPITAVF
DGDASLRSRP MRRILDPLEL IGAKVTASAE GGKLPLTLQG ASNPVPVVYR TPVASAQIKS
AVLLAGLAAP GVTTVIEQEA SRDHTELMLK HFGAEIVTTL EGTHGRRIAL TGQPELHGAP
VIVPADPSSA AFPLVAALIV DGSDLVLSDV MTNPLRTGLF ATLREMGASI EEDDVRGDAG
EPMVRLRVRA SKLRGVEVPP ERAPSMIDEY LVLAVAAAYA EGTTIMRGLH ELRVKESDRL
EATAAMLRVN GVKVEISDDD LIVEGRGHVP GGGLVATHMD HRIAMSALVM GLASDKPVKV
DDTAFIATSF PDFVPLMCKA GADFA