Gene BBta_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0101 
SymbolihfB 
ID5149595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp106425 
End bp106736 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content64% 
IMG OID640555128 
Productintegration host factor subunit beta 
Protein accessionYP_001236307 
Protein GI148251722 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.92315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAT CCGAGCTTGT TCAGCGTATC GCCGAGCACA ACCCGCACCT CTACCAGCGG 
GATGTCGAGA ACATCGTCAA TGCGATCCTT GATGAGATCG TGGCTGCGCT GGCGCGTGGT
GATCGCGTCG AGCTGCGCGG CTTCGGTGCC TTCTCGGTCA AGCATCGGCC CGCACGCGCC
GGGCGCAACC CGCGCACCGG CGCCCATGTG CCCGTGGACC AGAAGAGCGT CCCGTTCTTC
AAGACGGGCA AGGAAATGCG CGAGCGGCTG AACCGGGACA ATCCCGCCGG CGCAGCCGAC
ACCGACGATT GA
 
Protein sequence
MIKSELVQRI AEHNPHLYQR DVENIVNAIL DEIVAALARG DRVELRGFGA FSVKHRPARA 
GRNPRTGAHV PVDQKSVPFF KTGKEMRERL NRDNPAGAAD TDD