Gene BBta_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0087 
Symbol 
ID5155678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp90484 
End bp90789 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content65% 
IMG OID640555115 
Producthypothetical protein 
Protein accessionYP_001236294 
Protein GI148251709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.423806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.428785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGC GAATGAAGGG CGAGCGCGTC GTCTTCGAGC GCGGCATCCC GGCTTTCATG 
ATGGGCATCG ACGGCACCTG GCGGCGCAAC TGCACCATCG AGGATGTCTC CGAGACCGGC
GCCAAGCTGA CCGTCGAGGG CTCCGTCGAG GGACTGCATC TGAAGGAATT CTTCCTGCTG
CTGTCGTCGA CCGGCCTCGC CTACCGGCGC TGCGAGCTGG CCTGGGTCAA TGGCGACCAG
ATCGGCGTCA CCTTCCTGAA ACAGGGCAAG AAGAAGGCCA ACAAGCGCGC GGCCGCCGAG
GCCTGA
 
Protein sequence
MAERMKGERV VFERGIPAFM MGIDGTWRRN CTIEDVSETG AKLTVEGSVE GLHLKEFFLL 
LSSTGLAYRR CELAWVNGDQ IGVTFLKQGK KKANKRAAAE A