Gene BBta_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0081 
SymbolubiE 
ID5148852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp81560 
End bp82321 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content63% 
IMG OID640555109 
Productubiquinone/menaquinone biosynthesis methyltransferase 
Protein accessionYP_001236288 
Protein GI148251703 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.345232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGA CGGACCAGAC CACTCATTTC GGCTTCAGGG ACGTGCCGCT GGGCGAGAAG 
CAGACGCTGG TGAACGATGT GTTTCACAGC GTAGCACAGC GCTATGACCT GATGAACGAC
CTGATGTCTG CAGGACTGCA CCGCGTCTGG AAGGACATCA TGATCAACAC GCTGAACCCG
CCGAAGAGCG ATGCGCCGTT CGCGCTGCTC GACGTCGCGG GCGGCACCGG CGACATCTCC
TTCCGTGCCG CCAGGAAGGC TGGCGCAGGC TTCCATGCCA CCGTCTGCGA CATCAATGGC
GACATGCTCG AGGTCGGCCG CCAGCGCGCG CTGAAGCAAT ATCTCGAGGA CAAGGTCTCG
TTCGTCGAGG GCAATGCCGA GAAGCTCGCC TTTCCCGACC GGTCCTTCGA CGCCTATACG
ATCGCCTTCG GCATTCGCAA CGTGCCGCAG ATCGAGCTGG CGCTCGCCGA GGCCTATCGC
GTGCTCAAGC ATGGCGGCCG CTTTCTGTGC CTGGAATTCT CCACCGTCGA AGTGCCCGGG
CTCGACAAGC TCTACGACCT GTTCTCCTTC AACGTGATCC CGCAGCTCGG CCGCGCCGTC
ACCGGCGATG CCGAGTCCTA CCGCTATCTC GTCGAATCGA TCCGCCAGTT TCCGCGTCCC
AATGCCTTCG CCGAGATGAT CTCGGCGGCG GGCTTCTCGC GCGTCTCCTG GCAGACCCTC
TCCGGCGGCA TCGTCGCGCT TCATTCCGGC TGGCGTTTGT GA
 
Protein sequence
MDQTDQTTHF GFRDVPLGEK QTLVNDVFHS VAQRYDLMND LMSAGLHRVW KDIMINTLNP 
PKSDAPFALL DVAGGTGDIS FRAARKAGAG FHATVCDING DMLEVGRQRA LKQYLEDKVS
FVEGNAEKLA FPDRSFDAYT IAFGIRNVPQ IELALAEAYR VLKHGGRFLC LEFSTVEVPG
LDKLYDLFSF NVIPQLGRAV TGDAESYRYL VESIRQFPRP NAFAEMISAA GFSRVSWQTL
SGGIVALHSG WRL