Gene BBta_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0071 
Symbol 
ID5151998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp71793 
End bp72290 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content63% 
IMG OID640555099 
Productferric uptake regulator family protein 
Protein accessionYP_001236278 
Protein GI148251693 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.167395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.259956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGCGA GCAACAACGC CTCGATGAGT GGCCATGACC GGGGTACCCC GGAAGGTCTT 
GGGAGCGGAC GTCAGCCGGC TCTTAACGGC TGTCCGTGGC ACGACGTCAA CGAGATGCTG
CAGGCGGCCG GGCTACGCCC GACGCGCCAG CGCATGGCGC TGGGCTGGCT GCTGTTCGGC
AAGGGTGCGC GGCACCTGAC GGCCGAAATG CTTTACGAGG AAGCGACCCT GGCGAAGGTG
CCGGTCTCGC TCGCCACGGT CTATAATACG CTGAACCAGC TGACGGACGC AGGACTGCTG
CGCCAGGTCA GCGTTGACGG CACCAAGACC TATTTCGATA CCAACGTCAC CGCCCATCAC
CATTTCTACC TCGAGAACAA CCACGAGCTG GTCGATATTC CGGATCAGCA TCTCGCGCTG
TCGAAGCTGC CCGAGGCTCC GGACGGCTAC GAGATCGCCC GGATCGACAT GGTGGTCCGG
CTGCGCAAAA AGCGCTGA
 
Protein sequence
MDASNNASMS GHDRGTPEGL GSGRQPALNG CPWHDVNEML QAAGLRPTRQ RMALGWLLFG 
KGARHLTAEM LYEEATLAKV PVSLATVYNT LNQLTDAGLL RQVSVDGTKT YFDTNVTAHH
HFYLENNHEL VDIPDQHLAL SKLPEAPDGY EIARIDMVVR LRKKR