| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0062 |
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| Symbol | pnp |
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| ID | 5153082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 63789 |
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| End bp | 65951 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640555091 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001236270 |
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| Protein GI | 148251685 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.733598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACCA AGCATTCCGT CGAGATCGAC TGGGGTGGAC GTCCGCTCAA GCTTGAAACC
GGCAAGATCG CCCGCCAGGC CGACGGCGCC GTCGTCGCCA CCTATGGCGA GACCGTCGTG
CTCGCCACCG TCGTGGCCGC CAAGTCGCCG CGCGAAGGCG TCGACTTCCT GCCGCTGACC
GTCGACTATC AGGAAAAGGC CTATGCGGCC GGTCGCATCC CCGGCGGCTA TTTCAAGCGT
GAAGGCCGTC CGACCGAGAA GGAGACGCTG GTCTCCCGCC TGATCGACCG CCCGATCCGT
CCGCTGTTCG TCGACGCCTG GCGCAACGAG ACCCAGGTGA TCGTGACCAC CCTGTCGCAC
GACATGGAGA ACGATCCGGA CATCCTGGCG ATGGTCGCAG CCTCCGCAGC GCTGACCCTG
TCGGGCGTGC CGTTCAAGGG CCCGATCGGC GCCGCGCGCG TCGGCTTCGC CAATGACGAA
TACATCCTCA ATCCGACCCT CGACGAGATG ACCGACACCC AGCTCGATCT GGTCGTCGCC
GGCACCTCGG ACGCGGTGCT GATGGTGGAA TCGGAGGCCA AGGAGCTCAA CGAGGACATC
ATGCTCGGCG CGGTGATGTT CGGTCACCGT CACTTCCAGC CGGTGATCAA CGCGATCATC
GAGCTCGCCG AGAAGGCCGC CAAGGAGCCG CGCGACGTCG CGATCATCGA CAACAGCGCG
ATCGAGAAGG AAATGCTGGG CATCGCCGAG CAGGACCTGC GCAAGGCCTA TGCGATCCCG
GTCAAGCAGG AGCGCTACGC CGCCGTCGCC GCGGTCAAAG AAAAGGTGAT GGCCTACTTC
TTCCCAGAAG GGCAGGAGCC GAAATACGAG AAGCTGCGCG TTGCCGACGT GTTCAAGGAG
CTGGAAGCGA AGATCGTTCG CTGGAACATC CTGGACACCG GCCGCCGCAT CGACGGCCGC
GACGTCAAGA CCGTCCGCAA CATCGTGTGC GAGGTCGGCG TGCTGCCGCG CGCCCACGGC
TCGGCGCTGT TCACCCGCGG CGAGACCCAG GCGCTGGTCG TGACCACGCT CGGCACCGGC
GAGGACGAGC AGTATATCGA CGCGCTGTCG GGAACGTACA AAGAGACGTT CCTGCTGCAC
TACAACTTCC CTCCCTATTC GGTCGGTGAG ACCGGTCGTC TCGGCGGCAC CAAGCGCCGC
GAGATCGGCC ATGGCAAGCT GGCCTGGCGC GCGATCCACC CGGTGCTGCC GCCGCATCAC
GAGTTCCCCT ACACCACCCG CGTGGTGTCG GAGGTGACCG AGTCCAACGG CTCGTCGTCG
ATGGCCACCG TCTGCGGCTC GTCGCTGGCG CTGATGGATG CCGGCGTGCC GCTGAAGCGG
CCGACCGCCG GCATCGCGAT GGGTCTGATC CTGGAAGGCA GCCGCTACGC GGTTCTGTCG
GACATCCTCG GCGACGAGGA TCATCTCGGC GACATGGACT TCAAGGTCGC GGGCACCGAG
AGCGGCATCA CCTCGCTGCA GATGGACATC AAGATCGAGG GCATCACCGA GGAGATCATG
CGGGTTGCGC TGGGCCAGGC CCGCGAAGGC CGCATCCATA TCCTGGGTGA AATGTCCAAG
GCGCTGACCG CTGCGCGCGC CGAGCTCGGC GAATACGCGC CGCGCATCGA AACCTTCAAG
ATCCCGACCG ACAAGATCCG CGAAGTGATC GGCACCGGCG GCAAGGTGAT CCGCGAGATC
GTCGAGAAGA CCGGCGCCAA GGTCAACATC GAGGACGACG GCACCGTCAA GGTCGCCTCG
AGCGATGGCG AGGCGATGAA GGCCGCCATC AAGTGGATCA AGTCGATCGC CTCCGATCCG
GAGATCGGCC AGATCTATGA CGGCACCGTC GTCAAGGTGA TGGAGTTCGG CGCCTTCGTG
AACTTCTTCG GCACCCGCGA CGGCCTCGTC CATATCTCGC AGCTCGCCGA CAAGCGCGTG
CAGAAGACCA CCGACGTCGT CAAGGAAGGC GACAAGGTCA AGGTCAAGCT GCTCGGCTTC
GACGATCGGG GCAAGACCCG CCTGTCGATG AAGGCGGTCG ACCAGACCAC CGGCGAAGAC
CTCGAAGCCA AGCAGAAGGC CGAAGGCGGC GCCGAGGCAC CGCGTGAGGC CGCTGGCGAG
TAA
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| Protein sequence | MFTKHSVEID WGGRPLKLET GKIARQADGA VVATYGETVV LATVVAAKSP REGVDFLPLT
VDYQEKAYAA GRIPGGYFKR EGRPTEKETL VSRLIDRPIR PLFVDAWRNE TQVIVTTLSH
DMENDPDILA MVAASAALTL SGVPFKGPIG AARVGFANDE YILNPTLDEM TDTQLDLVVA
GTSDAVLMVE SEAKELNEDI MLGAVMFGHR HFQPVINAII ELAEKAAKEP RDVAIIDNSA
IEKEMLGIAE QDLRKAYAIP VKQERYAAVA AVKEKVMAYF FPEGQEPKYE KLRVADVFKE
LEAKIVRWNI LDTGRRIDGR DVKTVRNIVC EVGVLPRAHG SALFTRGETQ ALVVTTLGTG
EDEQYIDALS GTYKETFLLH YNFPPYSVGE TGRLGGTKRR EIGHGKLAWR AIHPVLPPHH
EFPYTTRVVS EVTESNGSSS MATVCGSSLA LMDAGVPLKR PTAGIAMGLI LEGSRYAVLS
DILGDEDHLG DMDFKVAGTE SGITSLQMDI KIEGITEEIM RVALGQAREG RIHILGEMSK
ALTAARAELG EYAPRIETFK IPTDKIREVI GTGGKVIREI VEKTGAKVNI EDDGTVKVAS
SDGEAMKAAI KWIKSIASDP EIGQIYDGTV VKVMEFGAFV NFFGTRDGLV HISQLADKRV
QKTTDVVKEG DKVKVKLLGF DDRGKTRLSM KAVDQTTGED LEAKQKAEGG AEAPREAAGE
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