| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0059 |
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| Symbol | truB |
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| ID | 5153080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 62054 |
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| End bp | 63154 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640555089 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001236268 |
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| Protein GI | 148251683 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC CCCCCGAAAC CGGCACTGTC GATACGACCC ACGCCGATAC GACCGCCGTC
AACGTCAAAA AACATCACGC GGCTGACGCA CGTCCGCGCG ACAACAATGA CCCGCGCAAC
AAGCCACGCC AGCACGGCAA CCAGCCGCGC CGCGACCGGC GCGACATCCA TGGCTGGGTC
GTTCTGGACA AGCCCATCGG CATGACCTCG ACCCAGGCCG TTGCGGTCGC CAAGCGGCTG
TTTCAGGCCA AGCGCGCCGG CCATGCCGGC ACGCTCGATC CGCTCGCCTC GGGCGGCCTG
CCGATCGCGC TCGGCGAAGC CACCAAGACC GTCCCCTTCG TGATGGATGG CCGCAAGCGC
TATCGCTTCA CCGTGACCTG GGGTGAGGAA CGCGATACCG ACGACACCGA GGGCCGCGTC
GTCCAGACCA GCACGAGCCG GCCGGATGTC GCGGCGATTC GGGCGCTGCT GCCGCAATTC
ACCGGCCGGA TCGAGCAGAC CCCGCCGCGC TATTCCGCGA TCAAGATCCA GGGCGAGCGC
GCCTACGATC TCGCCCGCGA CGGCGAGGTC GTCGAACTCC AGCCCCGTCC GGTCGAAATC
CACGAACTGA CCCTCGTCGA CCAGCCCGAT GCCGACCATT CGGTATTCGA GGCGGAATGC
GGCAAGGGAA CCTATGTCCG GGCGCTGGCC CGCGACATGG GCCGGCTGCT CGGCTGTTAC
GGCCATATCA GCGCGCTCCG GCGCACCCTG GTCGGTCCGT TTACCGAGAA CGACATGATT
CCGCTGGAAC AGCTGGAGGC TTTGTGCAAT AGAGCCGCGT CCGGTGAGGG AAGCCTCGCC
GACGCACTGC TGCCCGTTGA GACCGCGCTG GACGACATCC CGGCACTGGC CGTCACTCGG
GCTGATGCGG CAAGGCTCCA CAGGGGTCAA GCCGTTTTGT TGCGCGGACG GGATGCGCCC
CAGAGTAGCG GCACAGTCTA TGTCACGGTC GCAGGCCGCC TTTTGGCGCT TGCCGAAATT
GGCAATGGCG AACTCATCCC CAAGCGCGTG TTCAACCTGA CCGGACTGAC TGCCAGCTCC
GGTCGCAACG AAAGAGACTG A
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| Protein sequence | MTIPPETGTV DTTHADTTAV NVKKHHAADA RPRDNNDPRN KPRQHGNQPR RDRRDIHGWV
VLDKPIGMTS TQAVAVAKRL FQAKRAGHAG TLDPLASGGL PIALGEATKT VPFVMDGRKR
YRFTVTWGEE RDTDDTEGRV VQTSTSRPDV AAIRALLPQF TGRIEQTPPR YSAIKIQGER
AYDLARDGEV VELQPRPVEI HELTLVDQPD ADHSVFEAEC GKGTYVRALA RDMGRLLGCY
GHISALRRTL VGPFTENDMI PLEQLEALCN RAASGEGSLA DALLPVETAL DDIPALAVTR
ADAARLHRGQ AVLLRGRDAP QSSGTVYVTV AGRLLALAEI GNGELIPKRV FNLTGLTASS
GRNERD
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