Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0057 |
Symbol | infB |
ID | 5153078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 58710 |
End bp | 61475 |
Gene Length | 2766 bp |
Protein Length | 921 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640555087 |
Product | translation initiation factor IF-2 |
Protein accession | YP_001236266 |
Protein GI | 148251681 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA ACAACACTCC GGGCGACAAG AAACTGAGTG TCCCGACCAA GACCTTGACG CTGAAGCCGC GCGTCGAGAC TGGCACGGTA CGCCAGAGCT TCCCACATGG CCGGAGCAAG CAGGTAGTGG TCGAGAAGCG CGGCACCAAG CGCCGCGTCG GCGATGGGGC GCCCGATGCG CCGCATGCGC CGGAGCCGGT CGTCGCCAAG GCGCCGCCGC CGCCACCGCC AAGCAACCGT CCGTCAGGGC CCCGTCCCGG CTCTTCGCAG CGCGGCGGAT CCGGCGTGGT GCTGCGCACC CTGACCGAGG ATGAGCGTTC GGCCCGCGCC AGCGCGCTCG CCGACGCGCG CGTCCGCGAC ATGGAAGAGC GCCGTCAGGC CGAAGAGGAA GCCCGCCGCC GCGCCGAGCG CGAAGCCGCC GAACGCGCCG AGCGCGAGGC TGCCGAGGCG CGCCGCAAGG CCGAGGAAGA GCGCCACCGT CAGGAAGAGG AAGCCAAGCG CAAGGCCGAG CTCGAGGCCA AGAAGCGGTT CGGTGAAGGC GAGGCGCCCC GTCCGGCGAC CGCCGCGCCG CAGCAGCAGC CCGCCGCGGT CACAGCTCCC GCTCGTCCGG CGCAAGCCCC AGGTCGCCCG CAGGGCGCAC CGGGCAGCCG GCCACAGCAG ATCGGCACCA GCGCGCGCCC CGGCGGGGCA CAGCCCGCCG GCGCACGCCC TGCAGCCGCC CGTCCCGCGG GCGCAGGTCC GCTCGGCCGC GCGCCCGGCG TTGCCGCAGG TCCCGAGGAT GATGAGGGTC CGCGCCAGAT CCGCCGTGGT CCCGGCGGCG CTGCGCGTCC TGCGCCGCCG CCGAAGACCA CGCACAAGCC GGGTCCGCAG AAGCAGCGCG GCCGCCTGAC CGTCGTCACC GCGCTCACCG CCGACGACGT GCGCGAGCGC TCGATCGCCT CGTTCCGCCG CCGCACCCAG CGCCTCAAGG GCCATGCGGC CAATGAGCAG AAGGAGAAGC TGGTCCGCGA GGTGACGATT CCGGAAGCGA TCACCATTCA GGAACTCGCC AACCGCATGT CGGAGCGCGC GGTCGACGTC ATCCGTCTGC TGATGCGCCA GGGCGCGATG CACAAGATCA CCGACGTGAT CGACGCCGAC ACCGCACAGC TGATCGCCGA GGAACTCGGC CACAGCGTGA AGCGCGTCGC CGCCTCGGAC GTGGAAGAGG GCCTGTTCGA CGTCGTCGAC GATTCGACCG ACACCGAGCC GCGCTCGCCG GTCGTGACCG TGATGGGCCA TGTCGACCAC GGCAAGACCT CGCTGCTCGA CGCGCTGCGC CATGCCAACG TGGTGTCCGG CGAAGCCGGC GGCATCACCC AGCACATCGG CGCCTATCAG GTGACGGCGC CGGATTCCGG CAAGAAGATC ACCTTCATCG ACACGCCGGG CCACGCCGCG TTCACCGCGA TGCGCGCCCG CGGCGCCAAG GTCACCGACA TCGTCGTGCT GGTGGTCGCG GCCGATGACG GCGTCATGCC GCAGACGATC GAGGCCATCA ACCACGCCAA GGCGGCGAAG GTGCCGATGA TCGTGGCGAT CAACAAGATC GACAAGCCGG ATGCACGGCC CGATCGCGTC CGCACCGAGC TGCTGCAGCA CGAGGTGCAG GTCGAGTCCC TGGGTGGCGA AGTCGTCGAC GTCGAGGTCT CGGCCAAGAA CAAGACCAAC CTCGATCGTC TGCTCGAGAT GATCGCGCTG CAGGCCGACA TCCTCGACCT CAAGACCAAT TCGGATCGTC CGGCCGAGGG CACCGTGATC GAAGCCAAGC TCGATCGCGG CCGCGGTCCG GTCGCCACCG TGCTGGTCCA GCGCGGCACG TTGCGGGTCG GCGACATCAT CGTCGCCGGC GCGGAGATGG GCCGCGTCCG CGCGCTGATC TCGGATCAGG GCGAGACGTT GCAGGAGGCA GGTCCGTCGG TGCCGGTCGA GGTGCTCGGC TTCAACGGTC CGCCGGAAGC CGGCGACCGT CTTGCCGTGG TCGAGAACGA AGCCCGTGCC CGTCAGGTCA CCAGCTATCG CGCACACCAG AAGCGCGAGA ACGCGGCAGC CTCGATCTCC GGCATGCGCG GTTCGCTCGA GCAGATGATG TCGCAATTGA AGACCGCGGG CCGCAAGGAA TTCCCGCTGG TCATCAAGGC CGACGTGCAG GGCTCGCTGG AAGCCATTCT CGGCTCGCTG GAGAAGCTCG GCACCGACGA GGTCGCCGCG CGCATCCTGC ATGCCGGCGT CGGCGGCATC AGCGAGTCGG ACGTGACGCT CGCGGAAGGC TTCAACGCCG CGATCATCGG CTTCTCGGTG CGAGCCAACA AGGAAGCGGC CGCACTCGCC AAGCGCAACG GCATCGAGAT CCGCTACTAC AACATCATCT ACGACCTCGT GGATGACGTG AAGAAGGCGA TGAGCGGCCT GCTTGCGCCG ACGCTGCGCG AAACCATGCT CGGCAATGCG CAGATCCTGG AGGTGTTCAA CATCTCCAAG GTCGGCAAGG TCGCCGGCTG CCGCGTCACC GATGGCACTG TCGAGCGCGG CGCCAATGTC CGCCTGATCC GCGACAACGT CGTGGTTCAC GAGGGCAAGC TGTCGACCTT GAAGCGCTTC AAGGACGAAG TGAAGGAAGT GCAGGCCGGC CAGGAATGCG GCATGGCCTT CGAGAGCTAC GGCGACATGC GTGTCGGCGA CGTCATCGAG TGTTATCGCG TGGAGACCAT CCAGCGCTCG CTGTAA
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Protein sequence | MADNNTPGDK KLSVPTKTLT LKPRVETGTV RQSFPHGRSK QVVVEKRGTK RRVGDGAPDA PHAPEPVVAK APPPPPPSNR PSGPRPGSSQ RGGSGVVLRT LTEDERSARA SALADARVRD MEERRQAEEE ARRRAEREAA ERAEREAAEA RRKAEEERHR QEEEAKRKAE LEAKKRFGEG EAPRPATAAP QQQPAAVTAP ARPAQAPGRP QGAPGSRPQQ IGTSARPGGA QPAGARPAAA RPAGAGPLGR APGVAAGPED DEGPRQIRRG PGGAARPAPP PKTTHKPGPQ KQRGRLTVVT ALTADDVRER SIASFRRRTQ RLKGHAANEQ KEKLVREVTI PEAITIQELA NRMSERAVDV IRLLMRQGAM HKITDVIDAD TAQLIAEELG HSVKRVAASD VEEGLFDVVD DSTDTEPRSP VVTVMGHVDH GKTSLLDALR HANVVSGEAG GITQHIGAYQ VTAPDSGKKI TFIDTPGHAA FTAMRARGAK VTDIVVLVVA ADDGVMPQTI EAINHAKAAK VPMIVAINKI DKPDARPDRV RTELLQHEVQ VESLGGEVVD VEVSAKNKTN LDRLLEMIAL QADILDLKTN SDRPAEGTVI EAKLDRGRGP VATVLVQRGT LRVGDIIVAG AEMGRVRALI SDQGETLQEA GPSVPVEVLG FNGPPEAGDR LAVVENEARA RQVTSYRAHQ KRENAAASIS GMRGSLEQMM SQLKTAGRKE FPLVIKADVQ GSLEAILGSL EKLGTDEVAA RILHAGVGGI SESDVTLAEG FNAAIIGFSV RANKEAAALA KRNGIEIRYY NIIYDLVDDV KKAMSGLLAP TLRETMLGNA QILEVFNISK VGKVAGCRVT DGTVERGANV RLIRDNVVVH EGKLSTLKRF KDEVKEVQAG QECGMAFESY GDMRVGDVIE CYRVETIQRS L
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