Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0056 |
Symbol | |
ID | 5152433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 57920 |
End bp | 58633 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640555086 |
Product | hypothetical protein |
Protein accession | YP_001236265 |
Protein GI | 148251680 |
COG category | [K] Transcription |
COG ID | [COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.955133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCTT TGGCTGACCC CGAGCTCGAC AATGGACCGC GGACCGAGAA GTCCGCGACC ATGCGCATGT GCGCGGTCAG CCGCGAGGTG CGGCCGATCG AGGAGCTGAT CCGCTTCGTG GTCGGCCCGT CGGGCGAGGT CGTGCCCGAC ATCAAGCGCA AGCTGCCGGG ACGGGGATTG TGGATCACGG CGTCAAAGCC GGTGGTTGCG GAAGCGGTGC GGCGTCACCA TTTCAGCCGG GGCTTCAAGG CGAACGTCCG CGTCCCGCCG ACACTGGCCG ACGATCTGGA GGCCCTGCTG GCCCGCAGCG CCATCGAGGC CCTGGGGATC GCTGCCAAGG CCGGTCAGGT CGTGTCCGGA TTCTCCAAGG TGGAAGCGGC GCTGTCGCAG CGGCAATCCC GGACAGCATT GGCCGCCCTG CTTCATGCCT CGGACGGCGC AGCCGATGGG ATTCGCAAGC TCGACGCCCT GGTGCGGTCG AATGACGAGG ACCAGGGGCA AGCCCCGCCA TTTCCGATCA TCTGCTGCCT CACTTCGGCA GAATTGGATT TGGCACTTGG GCGCTCAAAT GTGATACATG CTGCCGTGCT CGCAGGCCCG GCGAGCAGGA CATTCCTGTC GCGCAGCCAG ACTCTGGTCC GATACCGGTC GGCCGACGCT GACAAGATTG CCGGAACCGC GGCCACGAAA TCTGCTTCGA CTTCGAAGAC ATAG
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Protein sequence | MLALADPELD NGPRTEKSAT MRMCAVSREV RPIEELIRFV VGPSGEVVPD IKRKLPGRGL WITASKPVVA EAVRRHHFSR GFKANVRVPP TLADDLEALL ARSAIEALGI AAKAGQVVSG FSKVEAALSQ RQSRTALAAL LHASDGAADG IRKLDALVRS NDEDQGQAPP FPIICCLTSA ELDLALGRSN VIHAAVLAGP ASRTFLSRSQ TLVRYRSADA DKIAGTAATK SASTSKT
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