Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0054 |
Symbol | |
ID | 5152431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 55461 |
End bp | 56222 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640555084 |
Product | hypothetical protein |
Protein accession | YP_001236263 |
Protein GI | 148251678 |
COG category | [S] Function unknown |
COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.454767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC CCACGTTCGC AGCCGCTGAC ACCGATCTTC TGACCGAGCC CCGTCTCGTG GTCGAGCCGG GTGTCGCCGC GCGCGTGGCC GCGGTGGCCG AGCCGGTGCT GCAGGGAATG GGTTACCGCC TGGTCCGGAT CCGCATCTCC GGCGAGGCCG GCTGCACCGT CCAGGTCATG GCCGAACGTC CCGACGGCAC GATGCAGATC GAGGATTGCG AGGCGGTGTC GCGGGCGCTG TCGCCGGTGC TGGACATCGC CGACCCGATC GATCGCGCCT ATCGGCTTGA GATCTCCTCG CCGGGCATCG ACCGACCGCT GGTCCGCCGC ACCGATTTCG AGCGCCACAT CGGCCATCTC GTCAAGATCG AGATGGCGGT GGCGCATCAG AACCGCAAAC GCTTCCGCGG CATCATCACC GGGCTCGACG GCGACGGCGT GTGCATCACC CGCGACGACG TGGCGAAAGA CCAGGACCCG AGCGTCGTGC TACCGATGAC CGACATCGGC GACGCCAAGC TGGTGCTGAC CGACGAGTTG ATCGCCGAGT CGATGCGCCG CGGCAAGGCG GCCGAGCGCG AGAAGAAGCG CGACCTCGGG CTTGCCCCGC CGCTGGCGCC GCACGCCAAG CCTGCGGCCC AGGCCAAGCC GAAACCGAAA TTGAAAGACG GCCAGGCGGC GAAGAAGCCG CTGCCGACCA ACACCAAGAA ACATCGCCTC GCCGCCGATC GTGCGCGCAG AGGCGAGATC GATCCTGATT AG
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Protein sequence | MTEPTFAAAD TDLLTEPRLV VEPGVAARVA AVAEPVLQGM GYRLVRIRIS GEAGCTVQVM AERPDGTMQI EDCEAVSRAL SPVLDIADPI DRAYRLEISS PGIDRPLVRR TDFERHIGHL VKIEMAVAHQ NRKRFRGIIT GLDGDGVCIT RDDVAKDQDP SVVLPMTDIG DAKLVLTDEL IAESMRRGKA AEREKKRDLG LAPPLAPHAK PAAQAKPKPK LKDGQAAKKP LPTNTKKHRL AADRARRGEI DPD
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