Gene BBta_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0053 
SymboltrmB 
ID5152430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp54119 
End bp54853 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content62% 
IMG OID640555083 
ProducttRNA (guanine-N(7)-)-methyltransferase 
Protein accessionYP_001236262 
Protein GI148251677 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID[TIGR00091] tRNA (guanine-N(7)-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTG CGACCATCAT GCCCGTCGAT CACGATCACG CCGACACCGA GGCTTCGCAC 
CGTCAGGGCT CCTTCTTTGG ACGGCGCAAA GGCCACAAGC TTCGTGCGCA TCAGGCCGAT
CTGATGGGAA ACCTGCTTCC CCATCTCGCC CTTGATCTTG CTTCGCCTGC TGATGCCGTG
CTGCCGGCGT TGTTCGATCC GCCGATCGAT GACCTGCGGA TCGAGATCGG ATTCGGCGGC
GGCGAGCATC TCGCGGCCGA AGCAAAGGCC TATCCACGAA CCGGGTTCAT CGGCTGCGAA
CCCTATATCA ACGGCATGGC CAAGATCCTT GCGACGATCG AGGCCGACAA TATCGGCAAT
GTCAGGCTGC TCGCGGGCGA TGCAGCCGAA CTGCTTGCCT GGCTGCCGCC GAGCTCGGTT
CAGCGGATCG ATCTGATCCA TCCAGATCCC TGGCCGAAGC GGCGCCATTG GAAACGACGC
TTCGTGCAAG AAGCGACGAT CGCCGCGATG GCGCGAGCCC TGAAACCTGG TGGCGAATTC
CGCTTCGTCA GCGACATCGC CGATTATTGC GCATGGACCT TGTGGCATCT GCTGCGCTCA
CCCGACTTCG CCTGGACTGC GGAGCGCGCT GACGATTGGC GCCTGCCATG GAACGGCTAC
ACAATGACGC GCTATGGCCG CAAGGCGATG CGCGAGGGCC GGGTCGCGAA CTATCTCATT
TTCAGGCGAC GCTGA
 
Protein sequence
MSTATIMPVD HDHADTEASH RQGSFFGRRK GHKLRAHQAD LMGNLLPHLA LDLASPADAV 
LPALFDPPID DLRIEIGFGG GEHLAAEAKA YPRTGFIGCE PYINGMAKIL ATIEADNIGN
VRLLAGDAAE LLAWLPPSSV QRIDLIHPDP WPKRRHWKRR FVQEATIAAM ARALKPGGEF
RFVSDIADYC AWTLWHLLRS PDFAWTAERA DDWRLPWNGY TMTRYGRKAM REGRVANYLI
FRRR