| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0052 |
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| Symbol | |
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| ID | 5152429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 52992 |
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| End bp | 54122 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640555082 |
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| Product | M20 family peptidase |
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| Protein accession | YP_001236261 |
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| Protein GI | 148251676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC CGACCAATCC GTTCGATAGC CGAACAATCC TCGATGGCAT CCGCCAATGG
GTGGAGATTG AAACACCCAC CGAAGCCCCT GATCAGATCA ATCAATTGGT CTCTTTGGTT
TCCGAGGGCT ATCGCGGGCT GGACGCAGTG GTCGAGCGCG TATCCGGCCG GGACGGCTGC
GGCGACCACC TGATCGCCCG GTCGGGCTGG GGCCAGCAGG AGCCGGGAAT CCTGATCCTC
AGCCATCTCG ATACGGTGCA TCCCATCGGC TTTCTTCGGC GCCTGCCGTT TTCGATCGAC
GGCGACGTCG CTTTCGGGCC GGGCATCTAC GACATGAAGG GCGGCGCCTA CCTTGCTTAT
CATGCGTTTC GTCATCTCTG TTTGACCGGA AAGCGATCGC CCCTCGGCAT TACTCATTTG
TTCGTCTCCG ACGAGGAGAT CGGCAGCCCG ACCTCGCGCG TACTGATCGA AGAGGAGGGC
CGCAAGGCCA AATACGTGCT GGTGACCGAG CCGGCGCGCG ACGGCGGCAG GATCGTCACC
GGCCGCAAAG GCGTGGCGCG TTTCGATGTC ACCATCCGCG GCGTTCCGGC CCACGCCGGT
GCGCGGCCGC AGGATGGACG CAGTGCGATC CGCGAACTCG CCAACGTGAT TCACGCGCTT
GAAGCTCTCA ATGATCTTGA GCGCGGCATC ACGGTGAATG TCGGCGTCGT CCGCGGCGGC
ACGCGTCCAA ATGTGATCGC CGAGGAAGCC TATGCAGAGG TCGATGCGCG CCTGCCGACG
CCAGCAGACG CCGAGGAGAT CGTGCCGAAG ATTCTCGGCC TGACGTCGCG CAGCGAGGGC
GTCAGCGTCG AAGTGACCGG CGGCGTCAAC CGCCCGCCTT ACGTCAAGGG CAACGCCGGT
GCTGCGCTGT TCGAACATGC GCGCTCGCTC GCCGAAGAGA TCGGCTTCGA GCTTGTCGAC
ACCATCACCG GCGGCGGCTC CGACGGCAAC TTCACCGCGC CGTTCACGGC GACCTTGGAC
GGGCTCGGCG TCGACGGCAA GGGCGCACAT ACGCATTACG AGCAGATGTA CATCTCCTCG
ATCGAGCCGC GGACGCGCCT CCTCCACCGT CTCTATCAAA CCCTGCGATG A
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| Protein sequence | MTVPTNPFDS RTILDGIRQW VEIETPTEAP DQINQLVSLV SEGYRGLDAV VERVSGRDGC
GDHLIARSGW GQQEPGILIL SHLDTVHPIG FLRRLPFSID GDVAFGPGIY DMKGGAYLAY
HAFRHLCLTG KRSPLGITHL FVSDEEIGSP TSRVLIEEEG RKAKYVLVTE PARDGGRIVT
GRKGVARFDV TIRGVPAHAG ARPQDGRSAI RELANVIHAL EALNDLERGI TVNVGVVRGG
TRPNVIAEEA YAEVDARLPT PADAEEIVPK ILGLTSRSEG VSVEVTGGVN RPPYVKGNAG
AALFEHARSL AEEIGFELVD TITGGGSDGN FTAPFTATLD GLGVDGKGAH THYEQMYISS
IEPRTRLLHR LYQTLR
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