Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0050 |
Symbol | lnt |
ID | 5153441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 50226 |
End bp | 51836 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640555080 |
Product | apolipoprotein N-acyltransferase |
Protein accession | YP_001236259 |
Protein GI | 148251674 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0815] Apolipoprotein N-acyltransferase |
TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCCGCC CTTCGTCGAT TCGGGGCGTC GCGCTCGGCG TCGTGCTGGC CTGGGGCTGG AAACGCGCAG CGATCGCCGT CGCGGCCGGT GCGCTGTCGG CGCTGGCCAT GGCGCCGTTC AACGCCTGGC CGGTGCTGGC GATCAGCTTT CCTGTGGTGG TCTGGCTGAT CGACGGCGCC GCGGCAGGCG CGCGCCGTGG CATACCAGCC GCTGCGTTGA CGGGCTTCTG CTTCGGCATG GGCTATTTCG TGCCCGGCCT GTACTGGATC GGCAACGCGT TCCTGGTCGA TGCCGAGACC TTCGCCTGGC TGATGCCGTT CGCCGTCCTC GGCCTGCCGG CCTATCTCGC CCTCTTCCAC GCCCTTGGCT TCGCCCTGGC GCGGTCGATA TGGACCCGTG GGCCGACACG GATCCTGGCG CTGGCCGTCT GCTTGACAGC GAGCGAATGG CTGCGGGGCC ACGCGCTCAC CGGCTTTCCC TGGAATACGT TCGGCTACGC GCTGTCTCAG CCGCTCGCCT TGGCGCAATC GGCATCGCTG ATCGGGCTGT GGGGGATGAC CTTCCTGGCC GTTGCGATCT TCGCAAGCCC CGCGGTGCTG ATCGACGGCA AGAGATGGCG CGACGGCTGG CATCTGCCAG CGGCGGCGGC GGCCGTGCTC GTCCTGATGG GCGCATTCGG CGCGATCCGG CTCGCCCAGC ACCCGACGTC CCTGGTCCGC GATCTCAAAC TCCGGATCAT GCAGCCGAAC CTGCAGCAGG ACGTGAAATT CAACTATGGC GCCAAGGCCG ACGTGATGCG GCGCTATCTG GCTCTGTCGG ATCGCGCCTC CGGGCCGAAC TCCACCGGTG TGCGCGACAC CAACATCCTG ATCTGGCCCG AATCGGCGTT TCCGTTCTTC CTTACGCGCG AGGCGGACGC GATGGCCCAG ATCGCTGATC TGCTGGCCCC GGACACAGTA CTGATCACCG GTTCGGTGCG CGCCCCTGAC GGCCCGCGCA ATGGCCCGAT CACCCGCGCC TACAATTCGA TCTACGTCAT CGATCACGAC GGCAGCGTGT TGTCATACTA CGATAAGCTT CATCTCGTCC CCTTCGGCGA GTACTTGCCG TTCCAGGACC TGATGGAGCG GATCGGTCTT GAGCAACTGA CAAGGGTGCA GGGCGGCTTC ATCGTCGGGA CAGCCAGGCG CAACCTCGAG GTGCCACACG CACCGCGTGT TCTTCCTTTG ATCTGCTATG AGGCCATTTT CCCGGGCGAT ATCAGCGGAT CGGACGAGCG ACCGGGCTGG ATCGTCAACC TGACGAACGA TGGCTGGTTC GGTATTTCGA CCGGTCCTCA TCAGCATCTA CAACAAGCGC AATGGCGCGC AATCGAGCAA GGCCTTCCAT TAGTTCGATC CGCGAACACT GGCATATCTG CTGTGATCGA TCCCGTCGGC CGCATTATCG CGCAGTTGCC GCTCGGCGCA GAGGGCATAC TCGATGCGGC GCTGCCAGCG GCCTTGCGGC CGACGATCTA CGCCAAGGCC GGCGATATCC CGGCGATCAT CCTGTTAGTG ATCGCTCTGG GCACCGTTGT GCGCCGGCGT GTTGCTGAAA AGCGTCCCTG A
|
Protein sequence | MIRPSSIRGV ALGVVLAWGW KRAAIAVAAG ALSALAMAPF NAWPVLAISF PVVVWLIDGA AAGARRGIPA AALTGFCFGM GYFVPGLYWI GNAFLVDAET FAWLMPFAVL GLPAYLALFH ALGFALARSI WTRGPTRILA LAVCLTASEW LRGHALTGFP WNTFGYALSQ PLALAQSASL IGLWGMTFLA VAIFASPAVL IDGKRWRDGW HLPAAAAAVL VLMGAFGAIR LAQHPTSLVR DLKLRIMQPN LQQDVKFNYG AKADVMRRYL ALSDRASGPN STGVRDTNIL IWPESAFPFF LTREADAMAQ IADLLAPDTV LITGSVRAPD GPRNGPITRA YNSIYVIDHD GSVLSYYDKL HLVPFGEYLP FQDLMERIGL EQLTRVQGGF IVGTARRNLE VPHAPRVLPL ICYEAIFPGD ISGSDERPGW IVNLTNDGWF GISTGPHQHL QQAQWRAIEQ GLPLVRSANT GISAVIDPVG RIIAQLPLGA EGILDAALPA ALRPTIYAKA GDIPAIILLV IALGTVVRRR VAEKRP
|
| |