| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0032 |
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| Symbol | gabD |
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| ID | 5152621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 34256 |
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| End bp | 35752 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640555063 |
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| Product | succinate semialdehyde dehydrogenase |
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| Protein accession | YP_001236242 |
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| Protein GI | 148251657 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.105667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.227937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGA CCGCAGCCAC CCGCACCACG CCGTCCGCGA CTGCCAGCTT GCGGGAACGT
CTGAAGGACG GCTCGCTGCT GCGTGAGCAG TGCTATATCG ACGGCAGCTG GGTCGGCGTT
CCCGTCTTCC CGGTCAACAA TCCGGCCACC GGCGCCGAAC TCGCCAAGGT GGCTCAGCTT
GGCGCCGCGG AGACGACGCA GGCGGTCGAG GCCGCCGCGC GGGCCTTCCC GGCCTGGGCC
AAGCTGACCG CCAAGCAGCG CTCCAATCTC CTGCGCAAAT GGTTCGAGCT GATCGTGGCG
AACCGCGAGG ACCTCGCGCT GATCCTCACC TCCGAGCAGG GCAAGCCGCT CAACGAGGCG
CTCGGCGAGG TCGATATCGG CGCCGCCTAT ATCGAGTTCT TCGCCGAGGA GGCGCGCCGC
GTCTATGGCG AGACGATCCC GACGCAGAAG CCGGATGCAC GGCTGCTCGC GCTCAAGCAG
CCGATCGGCG TCTGCGGTGC GATCACGCCG TGGAATTTTC CGAACTCGAT GATCACCCGC
AAAGTGTCCC CGGCCCTCGC TGCCGGCTGC ACCGTGGTGC TGAAGCCGGC CAATGAAACG
CCGCTGTCGG CGCTGGCGCT CGCCGTGCTG GCTGAGCGCG CCGGCATTCC GAAGGGCGTG
CTCAACATCA TCACCGGCGA CGCGCCGCCG ATCGGCAAGG TGCTGTGCGA GCATCCGGCC
GTTCGCTTCG TCGGCTTCAC CGGCTCGACC GAGGTCGGCA AGATCCTGTA CCGCCAGTCC
GCCGGCACGG TGAAGAAGCT CGGCCTCGAG CTCGGCGGTA ACGCGCCGTT CGTGGTGTTC
GACGATGCCG ATGTCGATGC GGCGGTCGAA GGCGCCATCG TCTCGAAGTA TCGCAACATG
GGCCAGACCT GCGTCTGCGC CAACCGCCTC TATGCACAGG ACGGCATCTA CGACGCCTTC
GTCGAGAAGC TGGCGGCGCG GGTCGCGGCG ATGAAGATCG GCGACGGCAC CGAGGCCGGC
GTTGTGCAGG GACCACTCAT CAACGAGGAG GCGGTGGAGA AGGTCGAGCG CCACATCGCC
GATGCGGTGA AGGGCGGCGC GACGATCGTC ACCGGCGGCA AGCGCCATGC GCTCGGCCGC
ACCTTCTTCG AGCCGACGGT TCTATCCAAC GTGAAGGCCG ATGCGCTGGT CGCGCATGAG
GAGACGTTCG GCCCGCTCGC GCCGGTCATC CGCTTCCAGA GCGAGGCCGA CGTCATCGCG
ATGTGCAACG CCTCGCCGTT CGGTCTTGCC TCCTACTTCT ACGCCCGCGA TCTCGGCCGC
GTCTGGCGCG TGGCGGAGGC GCTGGAGTCG GGCATGGTCG GCGTCAACAC CGGCCTGATC
ACCACCGAAG TGGCGCCGTT CGGCGGCGTC AAGGAGAGCG GCCTGGGGCG CGAGGGTTCG
CATCACGGCA TCGAGGAATA TCTCGAGATC AAATATGTGA TGATGGCCGG CGTGTGA
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| Protein sequence | MTPTAATRTT PSATASLRER LKDGSLLREQ CYIDGSWVGV PVFPVNNPAT GAELAKVAQL
GAAETTQAVE AAARAFPAWA KLTAKQRSNL LRKWFELIVA NREDLALILT SEQGKPLNEA
LGEVDIGAAY IEFFAEEARR VYGETIPTQK PDARLLALKQ PIGVCGAITP WNFPNSMITR
KVSPALAAGC TVVLKPANET PLSALALAVL AERAGIPKGV LNIITGDAPP IGKVLCEHPA
VRFVGFTGST EVGKILYRQS AGTVKKLGLE LGGNAPFVVF DDADVDAAVE GAIVSKYRNM
GQTCVCANRL YAQDGIYDAF VEKLAARVAA MKIGDGTEAG VVQGPLINEE AVEKVERHIA
DAVKGGATIV TGGKRHALGR TFFEPTVLSN VKADALVAHE ETFGPLAPVI RFQSEADVIA
MCNASPFGLA SYFYARDLGR VWRVAEALES GMVGVNTGLI TTEVAPFGGV KESGLGREGS
HHGIEEYLEI KYVMMAGV
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