Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0029 |
Symbol | |
ID | 5152088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 30314 |
End bp | 30943 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640555060 |
Product | putative glutathione S-transferase |
Protein accession | YP_001236239 |
Protein GI | 148251654 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0588223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.184572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCTGT ACGATTGCTC AACGGCGCCC AGTCCGCGCC GCGTGCGCAT CTTTCTCGCC GAGAAAGGTC TCACGCTTCC CACCGTGCAG GTCGATCTGC GCGGCGGCGA GCAGTTCACT CCGGCGTTTC GCGCCATGAA TCCCGGTTGC ACCGTGCCGG TGCTCGCGCT CGACAGCGGC GCGGCCATTA GCGACATCAT TGCCATCTGC CGCTATATCG AGGAGCTGCA TCCTGAGCCC GCCCTGATGG GACGAGACGC GGAAGAACGG GCGCTGATCG AATGCTGGGT GCGGCGGATC GAGTGGGATG GCATCTACGC CATCCAGGAA GCGTTCCGGA ACAGCATGCC GGGCCTGGAG CACCGCGCGC TGCCGGGCCC GCTGCCGCTC GAGCAGATTC CGGCGCTGGC GGAGCGCGGC CGCCTGCGGG CGCGGCATTT CCTGGCATGG CTCGATACGC GGCTCGCCGA TCACGCCTTC GTCGGCGGAG CCGCCTTCAC GATCGCCGAC ATCAGCGCCA TGGTGACCGT CGATTTTGCC GCGCGCGCGA AGCTCGATCC CCCCGAGCAC CTTCGCCATC TCAGGCGATG GCACCAGGAC GTGTCGAGCC GCCCGAGCGC GAAGGCGTGA
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Protein sequence | MMLYDCSTAP SPRRVRIFLA EKGLTLPTVQ VDLRGGEQFT PAFRAMNPGC TVPVLALDSG AAISDIIAIC RYIEELHPEP ALMGRDAEER ALIECWVRRI EWDGIYAIQE AFRNSMPGLE HRALPGPLPL EQIPALAERG RLRARHFLAW LDTRLADHAF VGGAAFTIAD ISAMVTVDFA ARAKLDPPEH LRHLRRWHQD VSSRPSAKA
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