| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0026 |
|---|
| Symbol | |
|---|
| ID | 5152085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 27393 |
|---|
| End bp | 28097 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640555057 |
|---|
| Product | uridine kinase |
|---|
| Protein accession | YP_001236236 |
|---|
| Protein GI | 148251651 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0572] Uridine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.777234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.135022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGATGA GCTCAAATCG CATGGCGAAG TTGCTGGATC TGGCACGTCA GATCTCGCGT
CTTGAGATCG GTCATCCGAT GAGAGTAGCC GTCGATGGCC GAACGGCATC GGGCAAGACG
ACCCTGTCGG ACGAGTTGGC AGAGCTGATC GAACGAAGCG GCCGGCCGGT CATCAGGACA
TCGATTGACG GGTTTCACCG TCCGAAAGCT CAGCGCTACG CGCGCGGACG GTTCTCCGCT
CTCGGCTACT ACAATGATGC CCGCGATCTG TCCGCCGTCA GATCCCTGTT GCTGGAGCCG
CTGGCGCCCG GTGGCGATCG CCTCTACAGG ACGGCGTCCT TCGATCTCAA GCGTGATGTG
GCGATCGCGC AGCCTTCCGC GCTGGCGCCG GTTGATGCGG TGCTGGTCGT CGACGGGACC
TTCCTTCAAC GACCTGAGCT GCGGGATCAT TGGGACATCG TGATCTTCGT AGAGACGTCG
AGAGGCGTCT CTGATGCAAG AGGTCTGAGG CGCGACCGTG ACCGCCTCGG CGAGCAGATT
GCCATGAAGG TCTATGCAGA ACGCTATGGA CCTGCTTTTG ACCTCTATGA GGAGACCTGT
GATCCCGCCA GAACAGCCGA TGTCGTTTTC AATAACGACG ATGTAGATGA TCCGATCCTT
CGCATCAGAC GGGGAGGCCG GCTCTCGCCG GATCAGCACT TCTGA
|
|---|
| Protein sequence | MSMSSNRMAK LLDLARQISR LEIGHPMRVA VDGRTASGKT TLSDELAELI ERSGRPVIRT
SIDGFHRPKA QRYARGRFSA LGYYNDARDL SAVRSLLLEP LAPGGDRLYR TASFDLKRDV
AIAQPSALAP VDAVLVVDGT FLQRPELRDH WDIVIFVETS RGVSDARGLR RDRDRLGEQI
AMKVYAERYG PAFDLYEETC DPARTADVVF NNDDVDDPIL RIRRGGRLSP DQHF
|
|---|
| |