Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0025 |
Symbol | |
ID | 5149344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 26671 |
End bp | 27330 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640555056 |
Product | putative haloacid dehalogenase-like hydrolase family protein |
Protein accession | YP_001236235 |
Protein GI | 148251650 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.412211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.132054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCGA TCCATTCTGT ATTGCTCGAT CTCGACGGCA CGCTCATCGA CTCGCGTCCC GGCATCGCCG CGAGCACGCT GGCGGCCTTG CGGTCGCTGG GACACACGCC CGACGACACG CTCGACGTCA CAGCCTTCAT CGGCCCGCCA TTGCAGGACA TGCTGCGTGT CCTACTGCAG GCCCATGGCG GCGACCGTGT CGACGACGCC GTCGCCGCCT ATCGCCAGCA TTATGGTGAC ACCGGCCTGT TCGACTGTGC GCTCTATCCC GGCATCCGCG ACGCGCTGCA GGCGATGCAC GACGCCGGCC TGCGGCTCGC GACGTCGAAG CGCGAAATGT TCGCGCGGCG CATCCTGGAG CATCTCGGCC TGGCATCGTA TTTCCGTGCC ATTCACGGCT CGGTGCCGTC AGGGGCGCTC GACCACAAGC CCGAGCTGCT CGCACATATC CTCGCTGAGC GGAATATCGC GGCGCCCGAC AGCCTCATGG TCGGCGACCG CCGCCATGAC GTCGCCGGCG CCCATGCTGT TCGCACGAGG AGCCTCGGTG TGCTCTGGGG TTATGGCAGC CGCGACGAGC TCGAAGCCGC TGGCGCAGAC CGCCTCGTGG AAAATCCCGC CGATCTCGCG GGCACCGTGC TGGCGATGCT GCGCCGATAG
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Protein sequence | MSPIHSVLLD LDGTLIDSRP GIAASTLAAL RSLGHTPDDT LDVTAFIGPP LQDMLRVLLQ AHGGDRVDDA VAAYRQHYGD TGLFDCALYP GIRDALQAMH DAGLRLATSK REMFARRILE HLGLASYFRA IHGSVPSGAL DHKPELLAHI LAERNIAAPD SLMVGDRRHD VAGAHAVRTR SLGVLWGYGS RDELEAAGAD RLVENPADLA GTVLAMLRR
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