Gene BBta_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0023 
Symbol 
ID5149342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp25173 
End bp25652 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content63% 
IMG OID640555054 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001236233 
Protein GI148251648 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.28543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.347248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAG CCAGACTCGA CGCGATCGAC CAACGCATCA TCGGAGAGCT GCAGGCCGAT 
GCGCGGCTGA GCAATGTCGA CCTAGCTGAC CGGGTCGGAT TGTCGCCTTC ACCCTGTCTT
CGCCGCGTCA AACGGCTGGA GCAGGAGGGT GTCATCCAGG GCTATCGCGC GGTCCTGAAC
CGCGACAGCG TCGGTCTCGG ATTTTCCGCA TTTCTCGCGG TCAAGATCGA GGGGCACGCG
AACGAACATG CCATGGCCTT CGAGGACACG GTGTGTGCGA TGCCGGAAGT CCTTGCCTGC
CATCTCGTCT CCGGCGACTC GGACTACCTG CTCGAGGTCG TCACGGCCGA TCTGGAGCAT
TACCGGCACT TCCTGGTGGA ACGGCTGCTG AGCCTGTCGA TCGTACGCGA GGTCAGGAGC
AACATCGCCA TCCAGACCCG CAAGGCCGCA GCCCCGCTGC CGTTGGAGCA GCCGCGCTGA
 
Protein sequence
MPKARLDAID QRIIGELQAD ARLSNVDLAD RVGLSPSPCL RRVKRLEQEG VIQGYRAVLN 
RDSVGLGFSA FLAVKIEGHA NEHAMAFEDT VCAMPEVLAC HLVSGDSDYL LEVVTADLEH
YRHFLVERLL SLSIVREVRS NIAIQTRKAA APLPLEQPR