Gene BBta_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0019 
Symbol 
ID5152375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp22342 
End bp23259 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID640555051 
Productputative Pirin family protein 
Protein accessionYP_001236230 
Protein GI148251645 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.495948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC AGCCATCGAT CGATCCCGAA TTCGGCGACC CCGCCTCCTG CGATGCGCTG 
GAGCACGTCA TCGTGCCGCG CACCCGCGAT CTCGGCGACG GCTTCGCCGT GCGCCGCGCG
CTGCCGCATG GGCGGCGACA AATGGTCGGT CCGTTCATCT TCTTCGATCA TTTCGGCCCG
GTGCAGTTCG TCTCCGGCAA GGGCATGGAC GTGCGGCCGC ATCCGCATAT TGGGCTCGCC
ACCGTCACCT ATCTGTTCGA CGGCGCCATC ATGCATCGCG ACAGCGAGGG CAATGTCCAG
GAGATCCAGC CCGGCGCGAT GAACCTGATG ACCGCCGGGC GCGGCATCGC GCATTCGGAG
CGGACGCCGG ATCTGCAGCG GCAGAATGGC CAGAGCATGC TGGGCCTGCA GAGCTGGATC
GCGCTCCCGG TCGAATCCGA AGAGATCGCG CCGAGCTTCC AGCACTACGC GGCCGACGCG
CTGCCGACGG TCAGCGACAC CGGCTTCACC GCGCGCGTGA TCGCCGGCAA AGCCTTCGGC
GCGGCCTCGC CGGTGACGAT GGTCTCGCCC TGGTTCTATG TCGAGGTCAC CGCGCAGGCC
GGAACGGTCG TCCCGCTCGA TCCCGACCAC GAGGAGCGCG CGATCTATAT CGTCGATGGC
GAAATCGAGA TCGCGCGCGA GCGCCATACC GGGCCGCGGC TGCTGATCTT CCGTCCCGGC
GACGCCATCA GCGTGCGCAT CGTGAAGCCG ACCCGGATGA TGTTCCTTGG CGGCGACGCG
CTGGAAGGGC CGCGCCATGT CTGGTGGAAT TTCGTCTCGT CCAGCAAGGA GCGCATCGAG
CAGGCCAAGC AGGACTGGAA AACCGGCCGC TTCGCCGCCG TTCCGCAGGA GCACGAGTTC
ATTCCGCTGC CGGAATAG
 
Protein sequence
MSWQPSIDPE FGDPASCDAL EHVIVPRTRD LGDGFAVRRA LPHGRRQMVG PFIFFDHFGP 
VQFVSGKGMD VRPHPHIGLA TVTYLFDGAI MHRDSEGNVQ EIQPGAMNLM TAGRGIAHSE
RTPDLQRQNG QSMLGLQSWI ALPVESEEIA PSFQHYAADA LPTVSDTGFT ARVIAGKAFG
AASPVTMVSP WFYVEVTAQA GTVVPLDPDH EERAIYIVDG EIEIARERHT GPRLLIFRPG
DAISVRIVKP TRMMFLGGDA LEGPRHVWWN FVSSSKERIE QAKQDWKTGR FAAVPQEHEF
IPLPE