Gene BBta_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0018 
Symbol 
ID5152374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp21125 
End bp22201 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content68% 
IMG OID640555050 
ProductAraC family transcriptional regulator 
Protein accessionYP_001236229 
Protein GI148251644 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.710124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGG AAAGCCTTGA TCTCGCGTTG CGTGCTGCCG CCATCGCCTT GCTTGCGGTG 
CTCGCCGTGT CGCTGGGACG CGACCTCGGC AAGCAATGGA GCGGCCGGCT CGCGATCGCC
CTGGCGCTGG GCGCGGCGGC GCATGCTTTG ACGTTCAACA TCGGCGGCGC CGCGGCCCCC
TCGCTGGCGG TCGCGCCCCT GATCGCGGTC GCAACCGCCG CCATCGTCGT CCTCTGGCTG
TTCTGCCGCG CGCTGTTCGA CGATGGTTTT GCGCCGCGTT GGCTGCACGG CCTGATCTGG
CTCGCAGTTT TCGGCTTCAG CATGATCAGT TGCCTCGTGC TGGGACCGTC CGGCCATGTG
CGGCTCGTGA TCGTCGCCAA CAATCTGCTG GCGCTTGGCT TCGTCGGGCT CGCCTTGGCG
CAGACGGTCC GCTCGTGGTC GGTGGATCTG GTCGAGCGAC GCAGGCGCGT CCGCGCTGTC
GTGGTCATTG CGGCGCTCGG CTATGGCGGC GTCAATGCGC TGCTGCAGAT TGGGACCGTC
GGCGGCGGTG CGTCGGAGCT CGCCAATGTC ATCAACGCGG CGATGTTGCT GGCGGTGGTC
GGCGCCGTCG CGCTGATGCT GCTGAGGGTC GGCGCCGGCG ACGTGTTCGC CGTGGAGACG
CCTCGGGCCA TGGCCGTCAG CGAGGCTGCA GCTGCCGCGG CGACCAAAGC CGGCGAGACG
GTCGCGAACC GCAGACTGGT CGAGCGGCTG ACCCGGCTGA TGGCGGATGA GCGGATCTAC
CGCCAGGAGA ACGTCACCAT CGGCGCACTG GCCACCAGGC TCGGCATTCC CGAATACCGG
TTGCGGCGGC TGATCAACAG TGAACTCGGC TATCGCAACT TCAGCAGCTT CCTGAACAGC
CACCGTATCG CGGAGGCGCA AGCGGCGCTC GCCGATCCCG CCCAGGCCGA GGTGCCCGTG
ATCACCATCG CGATGGATGC CGGGTTCCAG TCGCTCGGTC CCTTCAACCG CGCCTTCAAG
GCGGTGACCG GGGTGACGCC GACAGAATAC CGCCGCATGA GGCGGTCCGC GGCGTGA
 
Protein sequence
MPLESLDLAL RAAAIALLAV LAVSLGRDLG KQWSGRLAIA LALGAAAHAL TFNIGGAAAP 
SLAVAPLIAV ATAAIVVLWL FCRALFDDGF APRWLHGLIW LAVFGFSMIS CLVLGPSGHV
RLVIVANNLL ALGFVGLALA QTVRSWSVDL VERRRRVRAV VVIAALGYGG VNALLQIGTV
GGGASELANV INAAMLLAVV GAVALMLLRV GAGDVFAVET PRAMAVSEAA AAAATKAGET
VANRRLVERL TRLMADERIY RQENVTIGAL ATRLGIPEYR LRRLINSELG YRNFSSFLNS
HRIAEAQAAL ADPAQAEVPV ITIAMDAGFQ SLGPFNRAFK AVTGVTPTEY RRMRRSAA