Gene BBta_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0015 
Symbol 
ID5152371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp16935 
End bp18077 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content71% 
IMG OID640555047 
Producthypothetical protein 
Protein accessionYP_001236226 
Protein GI148251641 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGT TCAAGGAGCT GTTCGGGCGG GTCCGCGCCC GCAAGGCGCC GATGTCGCTG 
GCCGTGCGCG GCACGGTGGC GGCGACGCTG GCCTTCGCGA TCGCGACCGC ATTTCAGCTC
AAGCTGCCGC TGTGGGCGGT GCTGACCTCG CTGATCGTGA CGCAAGGCAG CGTCGGGCGT
TCGCTGAAGG CGACGCGCGA CTACATGTTC GGCACCATCG GCGGGGCGAT CTATGGCGGC
GCCATCACGG TCTTCATCCC GCATTCGGGC GAGCTGCAAC TGCTCGGCAT GCTGATCCTG
GCGGTGACGC CGCTCGCCTT CATCGCCGCG ATCAATCCCA GCCTCAACGC CGCGACGGTG
ACGGCGGTGA TTGTGCTGCT GGTGCCGACC ATGGGCCATC TCGATCCCCT GGGCTCGGCG
ATCGACCGCG TGTTCGAGGT CGCGGTCGGC GCGCTCACGG GACTCGCCGT CTCGTTCATC
GTGCTTCCGT CGCGCGCCCA TGTGCAGATG CGCAGCGCGG CGGGGCGGCT GCTCGAGCTG
ATCGCCGCGG CGCTGGCCGA ATTGCTTGCC GGCCTGTCGC GCGGCCGTGA CAACGACGCG
CTGCACCTGA TCCAGGACGG CATCGGCGCG GCGCTGACCG AGCTGAACGC GACCGGCGCC
GAGGCCGAGC GCGAGCGCGC GGCGCGGCTG TCCTCGGGCG CCGATACGGG GCCGCTGCTG
CGTACGATCC TCAGGCTGCG CCATGACGTC GTGATGATCG GTCGCGCCAG CGTGGTGCCG
CTGCCCTCGG AGCTGCAGGC GCGGCTGTCG GGTCCGGTGA CGCGCGTCAG CGACGCCATT
GCCAGCTATC TGCGGGGCTG CGCCGGCGCC ATCCGCAATG GTTCCGGCCC GCCGGCGATC
TGGCCGGTTC ATGTCGCCCT CAAGGCCTAT GCCGAGGCGG TCGCCGCGGT GCGCAGCGAC
GGCCTGACGC GCGGCCTGCC GGGCGACGCG GCGGAGCGCT TCTTCGCGCT CGGCTTCTCG
CTCGATCAGA TGCGGCAGAA CTTGATCGAC CTCGAGCGCG TCGTCGCCGA ATGGGCCGGC
GCGTCGACGG GCAAGCCGCA TCGGCCGCAG CCGGAGCAGA CGTCCGACAC GGCCGGCGCG
TGA
 
Protein sequence
MASFKELFGR VRARKAPMSL AVRGTVAATL AFAIATAFQL KLPLWAVLTS LIVTQGSVGR 
SLKATRDYMF GTIGGAIYGG AITVFIPHSG ELQLLGMLIL AVTPLAFIAA INPSLNAATV
TAVIVLLVPT MGHLDPLGSA IDRVFEVAVG ALTGLAVSFI VLPSRAHVQM RSAAGRLLEL
IAAALAELLA GLSRGRDNDA LHLIQDGIGA ALTELNATGA EAERERAARL SSGADTGPLL
RTILRLRHDV VMIGRASVVP LPSELQARLS GPVTRVSDAI ASYLRGCAGA IRNGSGPPAI
WPVHVALKAY AEAVAAVRSD GLTRGLPGDA AERFFALGFS LDQMRQNLID LERVVAEWAG
ASTGKPHRPQ PEQTSDTAGA