Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0009 |
Symbol | |
ID | 5156081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 10897 |
End bp | 11634 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640555041 |
Product | hypothetical protein |
Protein accession | YP_001236220 |
Protein GI | 148251635 |
COG category | [S] Function unknown |
COG ID | [COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0877665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCA GCTTGAAGAA ACTCTCGCCG GCGCTCTTCC CTTTGCTTCT TGGCCATGCG CCTGCGAGCG CGACCAGTCC AAGTTTCGAT TGCTCGCGCG CAAAATCGTC TGACGAAAAG CTGATCTGCG AAGATGACCA TCTCGCCGAA CTCGATCAGG CAGTCGCGAT CGCGTTCAAG CAAGCGCTTA CGGCAAAGAA GGCCGATGCT GCAGACGTAA AGACCAGCGC AAAGGAACGT CTCGACGACA GGCGCGCGTG TGGCGCGGAG CAAATTTGCA TTCTTGATGC GCAGGTCAAA GCAATCTCGT TGTTCGGAGA AATGGGATCG AATGTACCCG TCCCACCATG GATCGGCGAA TATCGTCTGA ACTATGCGAA AGTGCATCCC GCGGTGATGG ACGAAAAGCT GCCGCAGATG CGCGGCCATT GCACGCGAAC ACAAATAGCC TCCATCACCG GACGCTTTGG TGAGACGCTA AAATTTCCTC TCTCCAAAGA CGACGAGGTA AGCGGAACGG CAGTCAAATA CACAAACGAT ATCTACCAAA TTTCCTACGG CTATGAGGAA GACGTCGCGC GCTCGCACAT AGGCGACCAG GTGCTGCTCT GCCTTTCGTC GATTCCCAGA AATTGCCCGC CTGGCGATAA TCGCGGACGA GAATATTCTG CGACCAACCT GACATCCCGG ACTTCCTGGA TCATGCCGGA CTCACAACAT ATGTGTGGGG GTCCGTAA
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Protein sequence | MAISLKKLSP ALFPLLLGHA PASATSPSFD CSRAKSSDEK LICEDDHLAE LDQAVAIAFK QALTAKKADA ADVKTSAKER LDDRRACGAE QICILDAQVK AISLFGEMGS NVPVPPWIGE YRLNYAKVHP AVMDEKLPQM RGHCTRTQIA SITGRFGETL KFPLSKDDEV SGTAVKYTND IYQISYGYEE DVARSHIGDQ VLLCLSSIPR NCPPGDNRGR EYSATNLTSR TSWIMPDSQH MCGGP
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