Gene BBta_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0009 
Symbol 
ID5156081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp10897 
End bp11634 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content55% 
IMG OID640555041 
Producthypothetical protein 
Protein accessionYP_001236220 
Protein GI148251635 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0877665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA GCTTGAAGAA ACTCTCGCCG GCGCTCTTCC CTTTGCTTCT TGGCCATGCG 
CCTGCGAGCG CGACCAGTCC AAGTTTCGAT TGCTCGCGCG CAAAATCGTC TGACGAAAAG
CTGATCTGCG AAGATGACCA TCTCGCCGAA CTCGATCAGG CAGTCGCGAT CGCGTTCAAG
CAAGCGCTTA CGGCAAAGAA GGCCGATGCT GCAGACGTAA AGACCAGCGC AAAGGAACGT
CTCGACGACA GGCGCGCGTG TGGCGCGGAG CAAATTTGCA TTCTTGATGC GCAGGTCAAA
GCAATCTCGT TGTTCGGAGA AATGGGATCG AATGTACCCG TCCCACCATG GATCGGCGAA
TATCGTCTGA ACTATGCGAA AGTGCATCCC GCGGTGATGG ACGAAAAGCT GCCGCAGATG
CGCGGCCATT GCACGCGAAC ACAAATAGCC TCCATCACCG GACGCTTTGG TGAGACGCTA
AAATTTCCTC TCTCCAAAGA CGACGAGGTA AGCGGAACGG CAGTCAAATA CACAAACGAT
ATCTACCAAA TTTCCTACGG CTATGAGGAA GACGTCGCGC GCTCGCACAT AGGCGACCAG
GTGCTGCTCT GCCTTTCGTC GATTCCCAGA AATTGCCCGC CTGGCGATAA TCGCGGACGA
GAATATTCTG CGACCAACCT GACATCCCGG ACTTCCTGGA TCATGCCGGA CTCACAACAT
ATGTGTGGGG GTCCGTAA
 
Protein sequence
MAISLKKLSP ALFPLLLGHA PASATSPSFD CSRAKSSDEK LICEDDHLAE LDQAVAIAFK 
QALTAKKADA ADVKTSAKER LDDRRACGAE QICILDAQVK AISLFGEMGS NVPVPPWIGE
YRLNYAKVHP AVMDEKLPQM RGHCTRTQIA SITGRFGETL KFPLSKDDEV SGTAVKYTND
IYQISYGYEE DVARSHIGDQ VLLCLSSIPR NCPPGDNRGR EYSATNLTSR TSWIMPDSQH
MCGGP