| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_3098 |
|---|
| Symbol | |
|---|
| ID | 5161149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 3384238 |
|---|
| End bp | 3384921 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640555026 |
|---|
| Product | haloacid dehalogenase, type II |
|---|
| Protein accession | YP_001236205 |
|---|
| Protein GI | 148262078 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.651364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA TCGAGGGTAT CCGCGCCTGC GTGTTCGACG CCTATGGCAC GCTCTTCGAT
TTCGGCTCCG CCGTCACCCG CTGTCCGGAT GTGCCGGATG ACCGCCGCGC GGCGCTGGTG
ACACTCTGGC GGGACAAGCA GCTGCAATAC ACCTGGCTGC GCAGCCTGCA GAACCTCTAC
ACCGATTTTG AGACCGTCAC CGCCGACGCG CTCGATTTCG CGCTGGAGGC GACCGGCCTC
GCCGACCCCA GGCGGCGCGC CGCGCTGCTG GCTCTCTACC GCATCGTCTC GGCCTATCCG
GAGGTCAAGG CGACGCTGGG CACACTGAAG GCGAAGGGGA TTGCCACGGC GATACTCTCG
AACGGCACCC CGGCGATGCT CGCCGCCGCC ATCGCCCATG CCGGGCTCGG CGACGTGCTC
GACCATGTGC TGTCGGTCGA GGCGGTCGGC GTGTTCAAGA CCGATCCGCG CGTCTACCAG
TTGGTGCCGG CGCGGCTCGG GGTCCAGCGC AAGGAAGTCT GCTTTGTTTC CTCGAATGGC
TGGGATGCCT ACGGTGCCTC GGCCTTCGGC TTCCGCGTCG CCTGGTGCAA CCGGGCGCGG
CAGCCGGCGG AGCGGCTGCC TGGCGCGCCC GATGCGGCGA TCAGCGATCT CTCGGCCCTG
CCCGGCCTGC TCGGCCTCGG CTAA
|
|---|
| Protein sequence | MSAIEGIRAC VFDAYGTLFD FGSAVTRCPD VPDDRRAALV TLWRDKQLQY TWLRSLQNLY
TDFETVTADA LDFALEATGL ADPRRRAALL ALYRIVSAYP EVKATLGTLK AKGIATAILS
NGTPAMLAAA IAHAGLGDVL DHVLSVEAVG VFKTDPRVYQ LVPARLGVQR KEVCFVSSNG
WDAYGASAFG FRVAWCNRAR QPAERLPGAP DAAISDLSAL PGLLGLG
|
|---|
| |