Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3075 |
Symbol | |
ID | 5160998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 3357462 |
End bp | 3357983 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640555003 |
Product | GPW/gp25 family protein |
Protein accession | YP_001236182 |
Protein GI | 148262055 |
COG category | [S] Function unknown |
COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCC CGATCGGCTT CAGCGACCGG GTGCGCGACG CGGGCGCGCG GGTACAACTG TCGCTGCTCG ACCGATTGCT GGACGATGAA CCCGATCGCG ATCGGGACCG GCCGCTGTCC GCCGGCGAAG CGCTCAACAT GCTCCGCCGG TCGGTGCGCC GCGACCTTGA GGCGCTGTTG AATGCGAAGC GCCGCTGGCG TGCATTGCCG CCGGCGCTGG CAGAGCTGCG CAACTCGATC GCAGGCTACG GACTGCCGGA CTATACTGCC GGCAGCATGA GCGCCACAGG CGCGCGCGAG GCGTTCCGCG CGGAAGTCGA ACGCACGATC CGCCAGTTCG AGCCGCGATT TGCCCGCGTC TCGGTCACGC TCGTCAAGGC CGAGAACCCA TTGGACCCCA CGCTCTACAT GCGGATCGAG GGGCTGCTGC ATGCCGAGCC GGCACCTGAG CCGATCAGTT TCAACACTGT GGTCGACTCA ACCTCGGCCG AGATCGAGGT GAAGGGGGAA GGCGGTGTCT GA
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Protein sequence | MSGPIGFSDR VRDAGARVQL SLLDRLLDDE PDRDRDRPLS AGEALNMLRR SVRRDLEALL NAKRRWRALP PALAELRNSI AGYGLPDYTA GSMSATGARE AFRAEVERTI RQFEPRFARV SVTLVKAENP LDPTLYMRIE GLLHAEPAPE PISFNTVVDS TSAEIEVKGE GGV
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