Gene Acry_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3063 
Symbol 
ID5161153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp3344546 
End bp3345529 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content67% 
IMG OID640554992 
Productmalate dehydrogenase 
Protein accessionYP_001236171 
Protein GI148262044 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01759] malate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGT CCCCCGTCCG CATCGCTGTC ACCGGCGCAG CAGGGCAGAT CGCCTACGCG 
CTCGTCTTCC GCATCGCCAG CGGCGCGCTG CTCGGCCCCG ATCAGCCGGT CATCCTCCAC
CTTCTCGACC TGCCGCAGAT GCAGGGCGCG CTCGGCGGCG TCATGATGGA GCTGGAAGAC
TGCGCCTTCC CCCTGCTCGC CGGCATGGTC GCGACCGATG ATCCGAAGGT CGCCTTCAAG
GATATCGACA TCGGCTTCCT GGTCGGTGCC CGCCCGCGCG GCAAGGGCAT GGAGCGCAAG
GACCTGCTCG GCGCCAACGC CGAGATCTTC ACGGTTCAGG GCCGAGCCCT CAACGAGGTT
GCGAAGCGCT CCGCCCGCGT GCTGGTCGTC GGCAATCCGG CCAACACCAA TGCCTATATC
GCCATGAAAT CCGCCCCCGA CCTGTCGCCG GACTGCTTCT CGGCGATGAT CCGGCTCGAC
CACAACCGCG CCGCCTCGAT GCTCGCGGCC AAGGCGGGCG TCAATGTCGG TGATGTCGGC
AAGCTGATCG TATGGGGCAA CCATTCCCCA ACCATGTATC CGGACTACCG CTTCGCTGAA
GCCGGCGGCC GCAAGCTCGC CGAAGCCATC AACGACGAGG CCTGGAACCG CGACGTCTTC
ATTCCCACCG TCGGCAAGCG CGGCGCCGCG GTGATTGAAG CCCGCGGCGC GTCCTCGGCC
GCGTCCGCCG CGAATGCCGC CATCGACCAA GTGCGCGACT GGGTGGTCGG TTCGGATGGC
CGCTGGGTCT CGATGGCGAT TCCCTCCGAC GGCAGCTATG GCATCCCCGA AGGCATCATG
TTCGGCGTGC CCGTGACCAC CCAGGGAGGT GTCGTTACCC GGGTGCCGAA CCTCGCGATC
GACGCGTTCG CACAGTCCAG GCTCGACATC ACGCTGAACG AACTCAAGGA AGAACGCGAG
GCGATCGCGC ACCTCCTGGC CTGA
 
Protein sequence
MAKSPVRIAV TGAAGQIAYA LVFRIASGAL LGPDQPVILH LLDLPQMQGA LGGVMMELED 
CAFPLLAGMV ATDDPKVAFK DIDIGFLVGA RPRGKGMERK DLLGANAEIF TVQGRALNEV
AKRSARVLVV GNPANTNAYI AMKSAPDLSP DCFSAMIRLD HNRAASMLAA KAGVNVGDVG
KLIVWGNHSP TMYPDYRFAE AGGRKLAEAI NDEAWNRDVF IPTVGKRGAA VIEARGASSA
ASAANAAIDQ VRDWVVGSDG RWVSMAIPSD GSYGIPEGIM FGVPVTTQGG VVTRVPNLAI
DAFAQSRLDI TLNELKEERE AIAHLLA