Gene Acry_2978 details

Gene Information

• Locus tag: Acry_2978
• ID: 5160502
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 3260876
• End bp: 3261472
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640554908
• Product: TadE family protein
• Protein accession: YP_001236087
• Protein GI: 148261960
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4961] Flp pilus assembly protein TadG

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCCTA CTGACGGCAA GAGCGGCGCA TGCCCATGCA CATGCACATG GGCACGACGC 
ATCCTGCGCC GTCTCGCCGC CGCGTCCCAA CGCCGCCGCG CGGGTGTGGC GGCGGTCGAG 
TTCGCCCTCG TTCTGCCCGT GCTCCTGCTG TTCTTCTTCG CGACGACCGA GCTGGAACAG 
GCGGTGATCG TCAACCAGCT CGTCTCGCAA ACGGGTTCGA CCATCACCAA CATCGTCTCG 
CAATACACCA GCATCAGCGC GAGCACGCAG CTTCCGGACA TCTTCTCCGC CGCGTCGCAA 
ATCCTCGCCC CCTACCCCGC ATCGCCAGCC CAGATCGTCG TCAGCTGCAT CTCGATCGAC 
GATGATGGCG ATGCCAGGGT CGCCTGGAGC GAGGCCTCGA ACGCCACTGC GCTGCAACAG 
GGTCAGGTCG TCACCGTCCC GACCTCACTC GACGTGCCGA ATACCAGCGT CATCCTCGGA 
CAGGTCGATT ACGCGTTCGA GCCGACGCTC GATTTTCTCA AGCTCGGCCC GTTCCATCTC 
CAGTCCTCCG TCTACATGCT GCCCCGCAAT TCCTCGACGA TCAGCTTGGT GCCGTAA 

 

Protein sequence

MNPTDGKSGA CPCTCTWARR ILRRLAAASQ RRRAGVAAVE FALVLPVLLL FFFATTELEQ 
AVIVNQLVSQ TGSTITNIVS QYTSISASTQ LPDIFSAASQ ILAPYPASPA QIVVSCISID 
DDGDARVAWS EASNATALQQ GQVVTVPTSL DVPNTSVILG QVDYAFEPTL DFLKLGPFHL 
QSSVYMLPRN SSTISLVP