| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2959 |
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| Symbol | |
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| ID | 5159555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 3237413 |
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| End bp | 3240232 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640554889 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001236068 |
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| Protein GI | 148261941 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | [TIGR02917] putative PEP-CTERM system TPR-repeat lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.83474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAC CAGCGTCGAT CATGCGATCC GTCCGGTCGG TGACACTGTC ACTGGCCGTG
GCGGGGATGG CGGGCTTCGC CCCCGCCGCC CATGCCGGGC AACCGCGCTC CTACCAGCGG
GCGCAGGCGG CCGTGGCGCA CGGCAAGCTG CTCGATGCGC GGCTCGACCT GCTGAACGCC
GTCCGCCGGC ATCCGCATGA CGGCGCCGCG CACGCCCTGC TGGGCGAGGT CTCGCTCCAG
CTCGGCGATG CCGTCTCGGC CGAGCGCGAG GCGCGCAAGG CCATCGCCGC CGGCTACCAG
CCGAACCGCA GCCTGGCCCT GCTGCTGCGC AGCTACGTGG CCCAGGGCAG GTCGATCGCC
CTGCTGCACG ATTTCCCGAT CGGCTCGGCC ACCGGGGTCC ACGCCGCCGT CATCGCCGTG
GGGCGGGCGC GCGCCAACCT GGTCCTCGCC CGCTTCGACC GCGCCGAGGC CGACCTCGCG
CGCGCCGCCG GTTTCGCGCC CGATGCGCCG GGCCTGTACG AGACCCGGAT CGACCTCGCC
ATCGCCCGGC ACGACCTCGC CGCGGCGCGG CGCATGATCG CCGCGCGGCT CAAGGTGACG
CCGGCCGCGC CGGCCCTGCT GCGCCGCGAG GCGCAACTGG ACATCGGGGA GGGCCAGCCG
GCGCGCGCCG CAACCATCCT GCAGCGCGCC AATGCCGCGG ACCCGCTCAA CACCCGCGGC
AAACTGCTGC TCATCCAGGC TCACCTGGCC GCCGGCGCGC TGCCCGCGGC GCAGGCCGAG
CTCAAGCGCG CGGCTTCCCT GCTGCCCCAT TCGGCCGGGC TCGCGTATTT CCAGGCGACG
ATCGACGTCG ACGAACATCA CTGGCATCGC GCCAGCGCGC TGCTCGATCA TCTCGGCGGC
ATCGCCACGC AGCTGCCCGG CATCCTGTAT CTTCGCGCGA GGACGGATGC GGCGCTCGGC
CAGCCGGCCG CCGCGCTGAC CGCGGCCCAG AAGTTCGCGG CGCAGCAGCC CGGTGACAGC
GCCGCGCAGC TGCTGGTGGC CACGCTGGCG GTGCGGAGCG GTCATTACGG CGTCGCCAGC
CGCAGCCTCG ACAAGCTGGC GGCGGCCGGG AAGCTGGATG CCCAGGCCCT CGACCTGCGC
ACGGCGATCG AGATCCACGA CCACAAGTGG AATCAGGCCG AACAGGACGC GCTTCAGGCC
CTCAAGGCGG ATCCGAAGGA TCTCGCGGCG GGGATCAATC TGGCCGAGCT CGCCCAGCAG
CGCGGCGACT TCAAGGCGGC CGAGCAGCGA TACCGCGCGG TGCTCGCCGG GGTTCCCGCA
TCGGCGAGCG CCGTGCTCAC CTCGGTCGAG ATCCGGCTGG GATCGGCCGC GCTGCTGGCG
AACGACGCCC CGACGGTAAC GCAGATGGTC GCCGCGCTGG ACAAGCAGGG CGCCACACCC
GCCGCCGCGC AGCTGCAGGC GAAACTGGAC TTCCGCCGCG GCGATCTCGA CGCGGCGCGG
GCCGACCTGA CCCGGCTGCT CGCCGCCCGC CCCGGCTCGG TGACGGCGCA GCTCGGCCTC
GCGCGGGTCG ACCTGCTGAC GCAGCGGCCG GATGCGGCGC TGAAACGCCT GACCGCCGTG
GTGAAGGCGC ATCCCGCGGA TCCGCGCCCC GTGCTCGCGC TGGCCGCCCT GCAACGGACG
ATGAACCAGC CCGACGCCGC GCTGGCCACG CTCGATCGCG CGCATGACCG TGCCCCCGAC
AATGTCGCGT TCGTGGCGGC GATCCTGCAG CAGCGGCTCG CGGCGAAGCA GTTCACCGAG
GCCGGCAACC TGGTCTCGAC CCTTCCGGCC GCGATGCAGC GCCAGCCGCA GATCCTGCTC
CTGCGCGCGA AGCTCGATGC CGCGCAGGGG CGCCTCGATC AGGCCGCCCT GAACCTGCAA
TCCCTGCTGG CCGCGACGCC GGACGACGTG ACGTCGCGGC TGGCGCTCGC GCATATCGAC
ATGGCGCGCA AGCAGCCGCA GGCGGCCGAA GCGGTGATCG AGGCCGGGCT CGCGCGTGAT
CCGCGCCAGC TCGCCCTCAT GCAGGCCCGG GTCGGCCTCG CCCTGGCGCG GCACGGCGCC
GGCGCGGCCG AGCAGGAGGC GAAGCGACTC GCCGCCGCGC CCGACCACAT GCCCGAGGCC
GGCGCGCTGG AAGGCGATCT CGCCCTGTCG CTGCATCATT GGGCGAAGGC GGCGGCCGCG
TTCAAGGCCG CCTATGACGC CAATCCGTCG TCGGCGCTGG CGGCGGGCGC GATCCGCGCC
GACATCCAGG GCGGCCATCG CGACGCGGCG CTGGCCCTGC TCAAGGCGGC GAGCGCCCGG
TTCCCCGACA GCGTGGCGCT GAGCGACATG CGGGGATCGG TCGCGCTGTC CCGGGGCGAC
CTGAAGGCGG CCGCGGCGGA GTACGCACAC TCCCTGCGCC TGGCGCCGCA GGACGCGGTG
GCGCTCAACA ATCTCGCCTG GATCGAGGCG AAATCCGGCA AGCCGGACGC CGAGGCCTTG
GCCGAGCGCG CCTATGTCGG GGCGCCGACG CCGCAAACCG CCGACACACT CGGCTGGATC
CTTCTCCACG GCACGCCCGG CAAGGCGCGG CGCGCGCGGG CGGCGGCGCT GCTCGATGCG
GCGCACCGGG AAGACCCCGC CGACCCGTCG ATCGCCTATC ACGATGCCGC CGCGCTGGCC
CGCACCGGCG AGCGGGGCAA GGCGATCGCG ATCCTCAAGC CGATCGTCAC GCCGAAGGCC
TCGTTCGCCG ACCATGCCGC GGCGGCGGCG CTGCTGGCGA AACTGGAGCG GCAGGGCTGA
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| Protein sequence | MMKPASIMRS VRSVTLSLAV AGMAGFAPAA HAGQPRSYQR AQAAVAHGKL LDARLDLLNA
VRRHPHDGAA HALLGEVSLQ LGDAVSAERE ARKAIAAGYQ PNRSLALLLR SYVAQGRSIA
LLHDFPIGSA TGVHAAVIAV GRARANLVLA RFDRAEADLA RAAGFAPDAP GLYETRIDLA
IARHDLAAAR RMIAARLKVT PAAPALLRRE AQLDIGEGQP ARAATILQRA NAADPLNTRG
KLLLIQAHLA AGALPAAQAE LKRAASLLPH SAGLAYFQAT IDVDEHHWHR ASALLDHLGG
IATQLPGILY LRARTDAALG QPAAALTAAQ KFAAQQPGDS AAQLLVATLA VRSGHYGVAS
RSLDKLAAAG KLDAQALDLR TAIEIHDHKW NQAEQDALQA LKADPKDLAA GINLAELAQQ
RGDFKAAEQR YRAVLAGVPA SASAVLTSVE IRLGSAALLA NDAPTVTQMV AALDKQGATP
AAAQLQAKLD FRRGDLDAAR ADLTRLLAAR PGSVTAQLGL ARVDLLTQRP DAALKRLTAV
VKAHPADPRP VLALAALQRT MNQPDAALAT LDRAHDRAPD NVAFVAAILQ QRLAAKQFTE
AGNLVSTLPA AMQRQPQILL LRAKLDAAQG RLDQAALNLQ SLLAATPDDV TSRLALAHID
MARKQPQAAE AVIEAGLARD PRQLALMQAR VGLALARHGA GAAEQEAKRL AAAPDHMPEA
GALEGDLALS LHHWAKAAAA FKAAYDANPS SALAAGAIRA DIQGGHRDAA LALLKAASAR
FPDSVALSDM RGSVALSRGD LKAAAAEYAH SLRLAPQDAV ALNNLAWIEA KSGKPDAEAL
AERAYVGAPT PQTADTLGWI LLHGTPGKAR RARAAALLDA AHREDPADPS IAYHDAAALA
RTGERGKAIA ILKPIVTPKA SFADHAAAAA LLAKLERQG
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