| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2934 |
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| Symbol | |
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| ID | 5160292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 3198985 |
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| End bp | 3202053 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640554864 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001236043 |
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| Protein GI | 148261916 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.124614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAGC CGGCCGCGAC GACTGCGAAC CGGGCGCCCG CCCCCGTCTC GATCCGCCGC
ATCGATCCCC TGGCGAGCGC GACGTTCGAC GATGTCGCGA CGCAAATCGC CGATGCGGCG
GATCTGGGGT TCGATACCAT CCTGATCGGC GGGCCGTTCG CCACCGATCC GTCGCGCGAC
GCCGCCTCCG AGCTCGACCC CCTGCTGATT GCGCCCGATG GCGGGCCCTC CATGCCGGCA
CTCGCCCGGC TTGCGGGCGA GGCCAGGCGG CACGGGCTCG CGATGTGCCT CGAACTCCGG
CTCGATCAGG TCGCGCCGGG CGCGGCGCTG GTGCGGCGCC ATCCCGGCTG GTTCACCTAC
ACCGCCGACG GGCTGGCGTT CCGCTTCGGC GCGGATGGCG TTCCGGACGC CTGGTGGAAC
GACCTGGTCC TCCGGCTCCA GGAACACGGT CTGGACGGCC TCTGCCTGCT CGGCGCGCAC
CGCATGCCGG TGGCGGCGGC CGCGCGGCTG AACCGCGACG CGCGCGCGCG CAATCCGGGC
TGGACCGCCA TCGCCGCCCC CTTCGGCGCG GCGCCGCCGC AGATCGCCGG CCTCGTGGGC
GGGGAATTCG ATCACATCGC CGCATCGTCG TGCTGGTGGG ATGGCGAGGC CGCCTGGCTC
GCCGACGATC TCGAACGGAT CGCCTGCGCG GGCAACGTGG CCAGCTTCGC CGTGCCGCCG
CTCGCGGCGT CGCAAACCGT CGCGGACTGG CGCCTCGCCC TCGCGGGCTT TCTCGGCACG
GCCTGGGTGA TGAACGCCGC CATTCCGCCC CGCCAGCGCG CCGCCGTGAC GGCGCTCAAC
AGCTTGCGTC GGACCGAGCG CGAGGTGTTC GCGGGGCGGC CCTTCAGCCT CGCGCCGCCG
CACGCGGCAA CGTCCCTGTT CGCCCGGTTC GGCGCCGATG GCCGCGGACT GGCGCTCGCC
TGCTCCCCAA CGGGTGCCGA GCCCGATCGC CACGAACTGC ATGCGTTTCT GGCCGGCCGG
GCCGCGGCGC CGGTTCCGGT CCCGCTCGAG GGATGGAACG CCGCCGGCCT TGCCTGGTTC
ACGACCTCGC CGCTGCCCGC CCACCATTCA CCGGAATCCC CGCGCCATTC GGTCGATGCG
CCGCGCATCG CGATCGAGGC GATTGCGCCG GCCGTCGATG GCGGGCGCTT TCCGGTGAAG
CGGATGGCCG GTGAAGACGT GACGGTCGAG GCCGATCTCC TTTGCGACGG CCACGGCCGC
CTCGCGGCCG ACCTGCTCTG GCGGATGTCC GGCGAGCCAG CCTGGCGGCG CGCGCCGATG
GCGGCCATCG GCAACGATCG CTGGCGCGCC CAATTCGGGC TGAGCGCGAT CGGCCGCGCC
GAATTCACCA TCGAGGCATG GGTGGATCGC TACGGCACCT TCGCCGACGA GCTCGCGAAG
AAACACGAGG CCGGCCTCGA TGTCCGGCTT GAGCTTGTTG AAGGCCGGCA GTTGCTGGAC
GCCGCGATCG CGCGGGCCGG CGAAGAGGCC AGAACCATTC TGGCCGAATG CCGAGCGGGA
CTCGAACGCT GCGCTCCCGG AGAGCAGGTC GGAAAACTGA CCGCGCCCGC CATCATCGCC
GCGATGCGCG ATGCCGAGGA GCGTCGCTTC CTGGCACGGC ACGAACCCGC CTTGCCGATC
GATTCCGAGC GTCGCGCCGC GGGTTTCGCG AGCTGGTACG AAATCTTCCC CCGCAGCCAG
AGCGGCGACG CCGATCGCCA TGGCACCTTC GACGACGTGA TCGCCGCATT GCCGCGAATC
CGCGCCATGG GATTCGATGT CCTGTATTTC CCGCCGATCC ATCCCATCGG CCGGAAGAAC
CGCAAGGGGC CGAACAACAC GCTCGTCGCC AATCCCGGCG ATCCGGGAAG CCCCTACGCC
ATCGGCGGCG CCGAGGGTGG GCATGACGCG ATCCATCCCG AGCTCGGCTC GTTCGACGAT
TTTCGCCGCC TGATCTCTGC GGCGGCCGGG CAGGGCCTCG AAATCGCGCT GGACTTCGCC
ATCCAGTGCG CTCCGGACCA TCCATGGCTG GCCGAGCACC CGGAATGGTT CGACTGGCGG
CCGGACGGCT CGATCAAGTA TGCCGAAAAT CCGCCGAAGA AATACCAGGA TATCGTGAAT
GTCGATTTCT ACGCCGATGG CGCGCAACCC GCGCTCTGGC ATGCCTTGCG CGATATCGTC
CTCTTCTGGA TCCGCGAGGG GATACGGATC TTTCGCGTCG ACAATCCGCA TACCAAGCCG
TTCCCGTTCT GGGAGTGGCT GATCGCCGAT ATCCGGCGGA ACCATCCCGA CGTGATCTTT
CTCTCCGAGG CCTTTACCCG GCCGAAGATC ATGCACCGCC TGGCGAAGAT CGGATTCTCG
CAATCCTACA CCTATTTCAC CTGGAGAAAT TCCGCTGACG AAATGAAAAA TTACCTCGTC
GAACTGACGC AGTCATCGAC ACGGGACTAT TTCCGTCCCC ATTTCTTCGT CAACACGCCG
GACATAAATC CCGCGTTCCT GCAGACATGC AGCCGCCCCG GCTTCCTGAT CCGCGCGGCC
CTCGCCGCGA CGCTGTCCGG CCTCTGGGGC GTCTATAACG GCTTCGAGCT CTGCGAAGCC
GCCGCGCCGC CAGGGACGGA GGAATATCTC GATTCGGAAA AATACCAGAT CAGAAGCTGG
GATTATGGGC GGTCCGGAAA TATCGTGGCG GAAATTTCCC TGCTCAACCG GATCCGCCGG
CAGAACCCGG CCCTGCAAAG CCACCTCGGC GTGCACTTCA TCGATTGCGA TAATGACAAC
GTCCTGTGCT TCGAAAAGGC CAGTCCCGAT CGCTCGAACA TCGTGCTGGT CGCAATCAGT
TTCGATCCCC GCCAGTGGCA GACAACCAGG ATCGACCTCC CTCTCGAACG CTACGGGTCT
TCCGGGCGGG ATGCCCTGCA TCTCGAAGAT CTCATGCGCG GCGTCGCATT CACCTGGCAC
GGGCGGCAGC AGGTCGTCGA TTTCGACCCG GGCGAACTAC CCTTCAGCAT CTGGAGGATT
CGCAAATGA
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| Protein sequence | MNEPAATTAN RAPAPVSIRR IDPLASATFD DVATQIADAA DLGFDTILIG GPFATDPSRD
AASELDPLLI APDGGPSMPA LARLAGEARR HGLAMCLELR LDQVAPGAAL VRRHPGWFTY
TADGLAFRFG ADGVPDAWWN DLVLRLQEHG LDGLCLLGAH RMPVAAAARL NRDARARNPG
WTAIAAPFGA APPQIAGLVG GEFDHIAASS CWWDGEAAWL ADDLERIACA GNVASFAVPP
LAASQTVADW RLALAGFLGT AWVMNAAIPP RQRAAVTALN SLRRTEREVF AGRPFSLAPP
HAATSLFARF GADGRGLALA CSPTGAEPDR HELHAFLAGR AAAPVPVPLE GWNAAGLAWF
TTSPLPAHHS PESPRHSVDA PRIAIEAIAP AVDGGRFPVK RMAGEDVTVE ADLLCDGHGR
LAADLLWRMS GEPAWRRAPM AAIGNDRWRA QFGLSAIGRA EFTIEAWVDR YGTFADELAK
KHEAGLDVRL ELVEGRQLLD AAIARAGEEA RTILAECRAG LERCAPGEQV GKLTAPAIIA
AMRDAEERRF LARHEPALPI DSERRAAGFA SWYEIFPRSQ SGDADRHGTF DDVIAALPRI
RAMGFDVLYF PPIHPIGRKN RKGPNNTLVA NPGDPGSPYA IGGAEGGHDA IHPELGSFDD
FRRLISAAAG QGLEIALDFA IQCAPDHPWL AEHPEWFDWR PDGSIKYAEN PPKKYQDIVN
VDFYADGAQP ALWHALRDIV LFWIREGIRI FRVDNPHTKP FPFWEWLIAD IRRNHPDVIF
LSEAFTRPKI MHRLAKIGFS QSYTYFTWRN SADEMKNYLV ELTQSSTRDY FRPHFFVNTP
DINPAFLQTC SRPGFLIRAA LAATLSGLWG VYNGFELCEA AAPPGTEEYL DSEKYQIRSW
DYGRSGNIVA EISLLNRIRR QNPALQSHLG VHFIDCDNDN VLCFEKASPD RSNIVLVAIS
FDPRQWQTTR IDLPLERYGS SGRDALHLED LMRGVAFTWH GRQQVVDFDP GELPFSIWRI
RK
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