Gene Acry_2901 details

Gene Information

• Locus tag: Acry_2901
• ID: 5160125
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 3169109
• End bp: 3169552
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640554830
• Product: biopolymer transport protein ExbD/TolR
• Protein accession: YP_001236010
• Protein GI: 148261883
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02801] TolR protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00149833
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGGCG GTCTGCTCGA TCGGAAATCC GGCGGAAGGC GCGGTCGTTA CCGGCCCATG 
GCGGAAATCA ACGTCACCCC CCTCGTCGAC GTGATGCTCG TCTTGCTGAT CATCTTCATG 
ATCACGGCGC CGCTCATCAC CTCCGGCGTC ACCGTCAATT TGCCGCACGC CAACGCGAAG 
CCGGTCAATA CCGACGCGAC GCCGATCACC ATCTCGGTGA AGGCTGATGG CTCGGTGTAT 
CTGCAGAACT CGTCGGTCCA GCTCGACAAT CTGGTTTCGA CGCTGCAACA GATCGCCAAG 
CACAACACCG ACCGCCGCAT CTTCGTGCGT GGAGACACGG CAGTGCCCTA CGGCACGATG 
CTGAAGGTGA TGGCCACGAT CACCAATGGC GGGTTCACCA AGGTCGCGCT GCTCGCCCAG 
CAGCCGACGG CCACGAAACG CTGA 

 

Protein sequence

MAGGLLDRKS GGRRGRYRPM AEINVTPLVD VMLVLLIIFM ITAPLITSGV TVNLPHANAK 
PVNTDATPIT ISVKADGSVY LQNSSVQLDN LVSTLQQIAK HNTDRRIFVR GDTAVPYGTM 
LKVMATITNG GFTKVALLAQ QPTATKR