| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2890 |
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| Symbol | |
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| ID | 5159982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 3156877 |
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| End bp | 3160086 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640554819 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001235999 |
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| Protein GI | 148261872 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0871332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACTA ACAAGGCCGC CTGGTCGAGG GGCGCGGTTG GCTTTCTCTG GATTGCTGTC
GCACTCGTCG TTCTGATCTG TGGCGCATTC GAGCGGTTCG AATTCGAGGA TGTTGCGAAC
GGCATCCGGG CGCAGGCAAA GACGGTCGCG ACGGAATATG CAGGCACGAT CGCGCGGCGC
CTGTTCAACC AGTTTACCGA ACTGGAATTC ATCGCCATCA GCCTTCTTGC CCCGCAGCCG
GACGGGACGA TATCTCCATC GCCGCGAACG ATGCACGCTC TTTTCCGCTT CATGGCACTG
CATCCGAGCC TTTATGCGTT CAACGTGCAG TCGCCGGACG GTAACCGCAT CATCTGGTCG
ACGATCAGGC AACCGAAGCG ACCGATCACG ATGGCATCGG GGTTCACACC CCTGCCAGCC
CATGCCGGAT ATCTGCTGGG GCGGCCGCGC TTTGCCTCCC GCGTGCATAG TTACGCCATA
ACGATGCGGT ATCGCGCATC GGGTCCAGAC GGACGAACGC GGTATTTCGT TGGCACACCC
TACAGGCTCG ATCGGCTTTT CGCCTTTCCG AACCGCTTGC GCACACCGCT TGCGCTCTCC
GTGATCGATT TGAGAAACCA CAGGGAGCTT GCCACCTGGC GATCCGGCCG GCTCGATTTC
AGCGATTTTA ACAAGCGGGA CACGGGCATT GCCGGGAAGG CCGGCGGCAG ACCTCTCGTC
CGCGGTCGAG CCGGCATCGT GCCGGTGCCG GGCCTGCCGC TGGAAATTGC CGCGGGTTGG
CCCCGAAATG TCGTCTTCGA CGATTGGGTC CGGACAGGTC GTCTCCGCTG GGCCGTCGAG
GCGCTCTTTG TCGGGGTTAT GGCGCTTCTG GTGCTGCTTG TCGATCGAGG CCGCCGCCGC
GAGCAGCGGG CCGCCGAGGC AATCGAGCGG GTCCGAACGA CGGACGAGGC CACGGGTCTG
AGCACGCGTG CGATGTTCGA GGAACGGATC CCCGGGCTCT GCGATGCCCT CGGCCCCGGC
CGCCAACTGG CTGTCATCGT GATTGATATC GAGGGCTTCA CGGAAATCAA TGCCAGGCAC
GGCCGGAAGG CGGGCGGCAG GATTCTGCGC GCCCTTGCCG AACGCCTCAG GGCGCTGCCG
GATGCTCGGC TTCTGGCCCG TGTCGGCGCG GATTCCTTCG CATTCGTTCA TGTCGGCATC
CTGGAGCGCG AGATACATGC GCGGATCGAT GCGGCGCTGG CGGTTGTCGA AACGCCGTTC
GACATATCGG CAGGGGTTGC GGAGACCCTG AAACTCTCTC TCGGAAGCGC CCTTTACCCG
GCCGATACGG GATCGGCGGC GGCGTTGCTC GGCCGGGCCG AGGTGTCCAT TTTCGGCCAA
ATTCAACGCC AATACGGTAT CCGGCGCCGG GATCTCGACC CCTATTCGCC GGAATACCAT
GCCATGCTCG GATGGGGATG GCGCTTTCTC AATCATCTGA TCCCCGATTT GGCCGCCGGA
GTGTTCGACG ATTTCGCGGC GGACGCGCGG AATGTCCCCA TCATCCAGTC GCTCGGCACA
GAACGTGCCA GAAGGCTCGA AAATGGACTC CGGCGCCATG TCGCAATGTT GCTCGATCCG
GAATTGACGC GCGAGCGCCA TCGGGACGAG GCGTTGCGGG TCGGCCGCAT GCATGTCGCG
CTGGGGATCG ATATCAGTGC GCTGACGAGT GCGACCAGCG GCCTCTACCA GCGCATTGCG
GTACTGAGCC AGCAGATTCC GGGGCGCGTC AGCCAGCGCC AGATATATCT GGATATCATC
CTGCAACGTT GCGAATTCGA CATGGAGACC CAGCAGGATG CCGCGGCGCG GTTGCGCCAT
GAAATTCACA GGACACTCGG CGCACTGGCC TTGGAAACGC GCGGGCAGAC GCGCGGCGTC
GATGTCTGCG ACTCGATCAT CGGCGCGATG GAAACCTGGC CCTTCGTCGC CTTCAGCGCC
ATATACACCG AAGGTGTCGA CGGCCTGCTC GTTATCGAAG CGGAAAGCGC GGCTCATCGT
GCAACCATGA AACGGCAACC GCGGCTGCGT CTGGACGGGC GCAGCCTCAA GGAACTCGAT
GGGCATCCCA TTGCCGAGGC CTGGCTTTCG GGAGAGCCGG TCCATGGCGC GGCGGAGGAG
TTCCTTGGCG CTCGTGACAC TGACGCAAAT GACAGGCCCC TCGCCGAGGC GGGAATTCAA
AGCGCCGCGG CGCTGCCGAT CACGGAGACC GGCGGTCGCG TGCGTGCCAT TCTGGTTCTT
TACGGCCGGA TAGCCAATCA GTTCTCTGCG CCGGTATTGC GCGACTCCCT GGAGGCGCTC
GGCCTGATCG CCGCACGCGG CATTGAGCAG GCGCGCGATG AGTCGCTGGC GCTCCTCCCT
GCCGCCGACC GCCAGAGGTG GCGGAGCCGT CTGTTCGACG GGGGCTTGCA GATGTTCATG
CAGCCGATCG TCGACCTGCG AACGGGGCGG GTGGTCAAGG TCGAGGCCTT GGCACGGCTG
GAACTTCCGG GAGGGCAGTT GATCAGCCCG GGCCAGTTCC TGCCGATCCT GAGCCAGCAG
GATCTCGACA GGCTTTTCAT CGAGGGCATG CATATGGCGA TGAAGGCGGT TCGAGAGTAT
CGCAGCCTCG GCATCGTGGT CGATCTTTCG GTGAACCTGC CGCCGACGTC TCTCCGCAAT
CCCGATTGTT CGGGATGGAT CCGGGCGGCG CTTGAGACGC ACGATTTCGA TCCGAAAGAT
CTGACGCTCG AACTGCTGGA AGACCAGGAA ATCGGCGGTG GCGATGCGGG CCTCCGGGCG
ATCGAAGCCC TGCATCGTGC CGGAGTGCAA TTGGCGCTGG ATGATCTGGG AGCGGGTTAC
GGCAGTTTGA TGCGGCTTCG GAACCTTCCT TTTGACATGG TGAAGATCGA TCAGGGCCTG
GTCCGGGGCA TATCCGAGAA TGACCATCGT TCCATGAAAC TGGTCGAGGC GCTGGTGGAA
CTTGCGCGGC GGCTGGATAT CCCGGTGACG GTCGAAGGGT TGGAAACGTC CGCACTCATC
GACATGGCTC GTCGCTTTGG CGCCGAGTTC GGCCAGGGGT ACGGCATCGC TCGTCCGATG
CGGGCGGAGG AAATGCCGGG ATGGATCGCA GGGTTTCGTC TGCCTGCCGA AAGCAGGCCG
GCAGCGCCGT CATATGTCGC ATTGTATTGA
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| Protein sequence | MRTNKAAWSR GAVGFLWIAV ALVVLICGAF ERFEFEDVAN GIRAQAKTVA TEYAGTIARR
LFNQFTELEF IAISLLAPQP DGTISPSPRT MHALFRFMAL HPSLYAFNVQ SPDGNRIIWS
TIRQPKRPIT MASGFTPLPA HAGYLLGRPR FASRVHSYAI TMRYRASGPD GRTRYFVGTP
YRLDRLFAFP NRLRTPLALS VIDLRNHREL ATWRSGRLDF SDFNKRDTGI AGKAGGRPLV
RGRAGIVPVP GLPLEIAAGW PRNVVFDDWV RTGRLRWAVE ALFVGVMALL VLLVDRGRRR
EQRAAEAIER VRTTDEATGL STRAMFEERI PGLCDALGPG RQLAVIVIDI EGFTEINARH
GRKAGGRILR ALAERLRALP DARLLARVGA DSFAFVHVGI LEREIHARID AALAVVETPF
DISAGVAETL KLSLGSALYP ADTGSAAALL GRAEVSIFGQ IQRQYGIRRR DLDPYSPEYH
AMLGWGWRFL NHLIPDLAAG VFDDFAADAR NVPIIQSLGT ERARRLENGL RRHVAMLLDP
ELTRERHRDE ALRVGRMHVA LGIDISALTS ATSGLYQRIA VLSQQIPGRV SQRQIYLDII
LQRCEFDMET QQDAAARLRH EIHRTLGALA LETRGQTRGV DVCDSIIGAM ETWPFVAFSA
IYTEGVDGLL VIEAESAAHR ATMKRQPRLR LDGRSLKELD GHPIAEAWLS GEPVHGAAEE
FLGARDTDAN DRPLAEAGIQ SAAALPITET GGRVRAILVL YGRIANQFSA PVLRDSLEAL
GLIAARGIEQ ARDESLALLP AADRQRWRSR LFDGGLQMFM QPIVDLRTGR VVKVEALARL
ELPGGQLISP GQFLPILSQQ DLDRLFIEGM HMAMKAVREY RSLGIVVDLS VNLPPTSLRN
PDCSGWIRAA LETHDFDPKD LTLELLEDQE IGGGDAGLRA IEALHRAGVQ LALDDLGAGY
GSLMRLRNLP FDMVKIDQGL VRGISENDHR SMKLVEALVE LARRLDIPVT VEGLETSALI
DMARRFGAEF GQGYGIARPM RAEEMPGWIA GFRLPAESRP AAPSYVALY
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