| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2810 |
|---|
| Symbol | |
|---|
| ID | 5161698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 3078424 |
|---|
| End bp | 3079197 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640554737 |
|---|
| Product | diguanylate phosphodiesterase |
|---|
| Protein accession | YP_001235919 |
|---|
| Protein GI | 148261792 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTGA TAAAAGCGCG CCTCAGAGAC ACAAGCTCAT GTGCAGGCTG TCGACAGGGG
CAATTCGACA GGCCGCTCGC CATGGCATTT CAGCCAATCA TCGATGTCGC GGCACGATCA
GTGTTCGCCT ATGAGGCTTT GGTGCGCGGC CCCGCCGGAG AGTCGGCTGG GAGTATATTG
GAAACCATCG GCCAGTCGGA ACTCTATGCT TTTGACCAAG CATGTCGAGT GACGGCGATT
GAAACCGCCG CCGCTCTTGG GCTCGGCGAT AGTTCTTGCG ATCTCTCGAT CAATTTTCTG
CCCAATGCAG TCTATGAGCC CCGAGCGTGC ATTCGCACGA CTCTGCAAGC TGCCGCCCGG
ACCAGATTTC CAACCAGAAA GCTTATCTTC GAGATTAACG AGGGAGAATT GTTGAGCGCG
CCCGATCATT TGGCCGATAT CGTGGCGGAA TACGCAGCTA TGGGCTTCCG CACGGCGATT
GATGATTTTG GGTCGGGATA TTCCAATCTC AATCTACTCG CCAAATTCCG CCCGGATCTG
GTGAAGCTCG ATATGGAACT GATCCGCGGC ATCGAGTCAG ACAAGAGGCG CAGGAGCATC
GTCAGCCATT GCGCTGCGAT GTGCCGGGAA ATGGGGATCA CCGTCGTTGC CGAAGGCATC
GAAACGCTTG GCGAATGCTC GGCGTTGAAC GATCTCGGGA TTACGCTCAT GCAAGGCTAT
CTTTTCGCGA AGCCAGGCTT TCGCAGCTTG CCAACACCTA CGTGGGCGAA CTGA
|
|---|
| Protein sequence | MGLIKARLRD TSSCAGCRQG QFDRPLAMAF QPIIDVAARS VFAYEALVRG PAGESAGSIL
ETIGQSELYA FDQACRVTAI ETAAALGLGD SSCDLSINFL PNAVYEPRAC IRTTLQAAAR
TRFPTRKLIF EINEGELLSA PDHLADIVAE YAAMGFRTAI DDFGSGYSNL NLLAKFRPDL
VKLDMELIRG IESDKRRRSI VSHCAAMCRE MGITVVAEGI ETLGECSALN DLGITLMQGY
LFAKPGFRSL PTPTWAN
|
|---|
| |