Gene Acry_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_2780 
Symbol 
ID5160446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp3042995 
End bp3044083 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content65% 
IMG OID640554707 
ProductABC-type sugar transport system periplasmic component-like protein 
Protein accessionYP_001235890 
Protein GI148261763 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.741659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGGC GGACTGGAAA CCCTCTCGGC TTCGCCCTGG CTCTGGCTTC GACCGCTACC 
CTCGTCACCG GCCTCGCCAT CCCTCGCGCC ATGGCGAAAT CCACCGCCCA TGACGGCATC 
GCCCTCAGCA ATTCCTACGC CGGCAACAGC TGGCGCCAGC AGATGCTCAA GATGTGGAAG 
GAAGCCAGCC ACCAGGCCAT CTCCGGCGGC ATCGTCGCGA AAACCAAGAT CGTCAACGCC 
GACAATTCCG CCTCCCAGCA GGAATCCCAG ATCGAGGATC TGATCCTCGA AGGCTGGAAG 
GCCATCGTCA TCGACGCCGC CTCGCCCACG GCGCTGAACG GCGTCATCGC CAAGGCCTGC 
CACGCCGGCA TCGTCGTCGT CGCGTTCGAC AGTCTCGTCA CCGCCCCCTG CGCCTACAAG 
GTCGCCTACA ACTACGTTCA CATGGGGCAG ATCGAAGCCC GCTTCGTCGC GAAATCCCTG 
CACGGCAAGG GCAATGTGCT GGAAGTTCGC GGCATCGCCG GAACCTCTGT CGATACCGAT 
ATCCACAAGG GGATCGTCGA GACGTTCAGG AAATATCCGA AGATGAAGAT CGTCGGCTCC 
GTCCACGGCG ACTGGACGCA GAGCATCGCG CAGAAGGCCG TCGCCGGCGT GCTGCCCTCG 
TTGCCGCATA TCGAGGCCGT CGTCACCCAG GGCGGCGATG GCTACGGCAC CTACGAAGCC 
TTCATGGCCG CCGGGCGGGG AACGCCGCTG ATCATTTTCG GCAACCGCCA GGTCGAGCTT 
TCGCTCTGGG CGAAGCTGGA CAAGAAGCCG GGCGGATACC ACACGATCTC GCTCTCCTCG 
GCGCCCGGCG TGTCGTCCAT CGCCCTCTGG GTTGCCCAGC AGATCCTCGC CGGCGCGAAG 
GTGCCGAAAG TGGTGAACGT CCCGCTGCTG CAGATCCACG CCAACCAGTT GCAGAGCTGG 
CTCAAGGTGC TGCCGCAGGG CGCTGTCGCG ACACCGCTCT ACAGCCAGAC ATGGACGGAA 
CGCCTGATCG CGGCGAATCT CCATCACACG GCGCCGCCGG CCTCGCCCGG CCCGGAGACG 
CTGCACTGA
 
Protein sequence
MTRRTGNPLG FALALASTAT LVTGLAIPRA MAKSTAHDGI ALSNSYAGNS WRQQMLKMWK 
EASHQAISGG IVAKTKIVNA DNSASQQESQ IEDLILEGWK AIVIDAASPT ALNGVIAKAC 
HAGIVVVAFD SLVTAPCAYK VAYNYVHMGQ IEARFVAKSL HGKGNVLEVR GIAGTSVDTD 
IHKGIVETFR KYPKMKIVGS VHGDWTQSIA QKAVAGVLPS LPHIEAVVTQ GGDGYGTYEA 
FMAAGRGTPL IIFGNRQVEL SLWAKLDKKP GGYHTISLSS APGVSSIALW VAQQILAGAK 
VPKVVNVPLL QIHANQLQSW LKVLPQGAVA TPLYSQTWTE RLIAANLHHT APPASPGPET 
LH